Input sequence

Protein name Collagen alpha-6(VI) chain
Organism Homo sapiens Length 2263
Disorder content 15.5% ProS content 15.2%
IDEAL NA UniProt A6NMZ7

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 2263 1-16 17-528 529-533 534-1400 1401-1425 1426-1481 1482-1497 1498-1513 1514-1713 1714-1730 1731-1753 1754-2188 2189-2227 2228-2232 2233-2263 17-528 534-1400 1426-1481 1498-1513 1714-1730 1754-2188 1-16 1401-1425 1482-1497 1514-1713 1731-1753 2189-2227 2233-2263 1-16 1401-1425 1482-1497 1514-1713 1731-1753 2189-2191 2198-2227 2233-2263 434-796 809-1176 27-197 229-407 1757-1854 1412-1499 1621-1685 620-797 808-987 1964-2140 433-612 998-1177 1749-1950 26-218 228-407 1412-1499 1621-1693 1468-1585 622-767 809-949 436-598 1000-1148 229-379 1965-2133 1757-1885 27-199 229-407 436-606 622-791 809-982 1000-1171 1392-1451 1452-1511 1525-1584 1585-1644 1656-1715 1757-1933 1965-2144 432-611 987-1176 225-411 23-204 607-797 798-995 1949-2175 1748-1948 1428-1695 25-207 222-409 434-614 616-797 802-988 998-1179 1184-1385 1750-1948 1958-2174 1392-1410 1525-1549 1588-1618 1701-1725 4cn9A(8-387) 1e-34 31.01% 4cn9A(10-387) 2e-27 27.2% 4igiA(3-173) 5e-16 29.65% 4igiA(3-179) 3e-15 30.0% 3gxbA(4-96) 0.0005 26.53% 2pneA(2-81) 3e-07 36.36% 2pneA(6-81) 0.0002 38.16% 1lfaA(2-181) 1e-46 24.18% 1lfaA(3-180) 5e-37 25.0% 1lfaA(3-158) 3e-14 15.64% 1n3yA(1-188) 4e-44 22.87% 1n3yA(2-188) 8e-43 18.18% 1ijbA(7-202) 1e-08 14.56% 4igiA(2-194) 1e-24 26.8% 4igiA(2-179) 4e-24 29.28% 2pneA(2-81) 7e-16 36.36% 2pneA(6-80) 1e-13 38.67% 2pneA(1-76) 8e-12 25.42% PF00092(1-142) 1e-10 33.11% PF00092(1-138) 3e-09 31.25% PF00092(1-162) 6e-09 31.14% PF00092(1-147) 8e-09 32.03% PF00092(1-148) 7e-07 27.74% PF00092(1-148) 0.0003 29.41% PF00092(1-120) 0.0007 26.36% PF00092 3.2e-33 120.9% PF00092 2.8e-38 137.7% PF00092 4.3e-50 177.0% PF00092 1.3e-58 205.3% PF00092 1.1e-49 175.7% PF00092 1e-43 155.8% PF01391 3.7e-10 44.3% PF01391 1.3e-12 52.5% PF01391 2.5e-06 31.7% PF01391 4.4e-10 44.1% PF01391 3.6e-09 41.1% PF00092 4.5e-10 44.1% PF00092 3.2e-16 64.5% 1ao3A(2-187) 1e-32 26.34% 1ao3A(1-187) 2e-24 18.27% 1ao3A(2-186) 7e-24 23.94% 1ao3A(2-184) 7e-18 22.58% 1auqA(2-199) 2e-31 19.6% 1auqA(6-206) 2e-25 16.67% 1auqA(1-206) 8e-22 14.98% 1auqA(8-207) 1e-11 16.35% 1af0A1(2-221) 7e-23 9.89% c.62.1 1e-38 127.0% c.62.1 2.9e-44 146.9% c.62.1 3.4e-53 174.5% c.62.1 8.4e-54 178.6% c.62.1 2.7e-47 157.0% c.62.1 1.4e-48 159.3% c.62.1 3.1e-16 53.9% c.62.1 8.1e-31 104.0% c.62.1 4.6e-33 111.6%

Sequence

MMLLILFLVIICSHISVNQDSGPEYADVVFLVDSSDRLGSKSFPFVKMFITKMISSLPIE
ADKYRVALAQYSDKLHSEFHLSTFKGRSPMLNHLRKNFGFIGGSLQIGKALQEAHRTYFS
APANGRDKKQFPPILVVLASSESEDNVEEASKALRKDGVKIISVGVQKASEENLKAMATS
QFHFNLRTVRDLSMFSQNMTHIIKDVIKYKEGAVDDIFVEACQGPSMADVVFLLDMSING
SEENFDYLKGFLEESVSALDIKENCMRVGLVAYSNETKVINSLSMGINKSEVLQHIQNLS
PRTGKAYTGAAIKKLRKEVFSARNGSRKNQGVPQIAVLVTHRDSEDNVTKAAVNLRREGV
TIFTLGIEGASDTQLEKIASHPAEQYVSKLKTFADLAAHNQTFLKKLRNQITHTVSVFSE
RTETLKSGCVDTEEADIYLLIDGSGSTQATDFHEMKTFLSEVVGMFNIAPHKVRVGAVQY
ADSWDLEFEINKYSNKQDLGKAIENIRQMGGNTNTGAALNFTLSLLQKAKKQRGNKVPCH
LVVLTNGMSKDSILEPANRLREEHIRVYAIGIKEANQTQLREIAGEEKRVYYVHDFDALK
DIRNQVVQEICTEEACKEMKADIMFLVDSSGSIGPENFSKMKTFMKNLVSKSQIGPDRVQ
IGVVQFSDINKEEFQLNRFMSQSDISNAIDQMAHIGQTTLTGSALSFVSQYFSPTKGARP
NIRKFLILITDGEAQDIVKEPAVVLRQEGVIIYSVGVFGSNVTQLEEISGRPEMVFYVEN
FDILQRIEDDLVFGICSPREECKRIEVLDVVFVIDSSGSIDYDEYNIMKDFMIGLVKKAD
VGKNQVRFGALKYADDPEVLFYLDDFGTKLEVISVLQNDQAMGGSTYTAEALGFSDHMFT
EARGSRLNKGVPQVLIVITDGESHDADKLNATAKALRDKGILVLAVGIDGANPVELLAMA
GSSDKYFFVETFGGLKGIFSDVTASVCNSSKVDCEIDKVDLVFLMDGSTSIQPNDFKKMK
EFLASVVQDFDVSLNRVRIGAAQFSDTYHPEFPLGTFIGEKEISFQIENIKQIFGNTHIG
AALREVEHYFRPDMGSRINTGTPQVLLVLTDGQSQDEVAQAAEALRHRGIDIYSVGIGDV
DDQQLIQITGTAEKKLTVHNFDELKKVNKRIVRNICTTAGESNCFVDVVVGFDVSTQEKG
QTLLEGQPWMETYLQDILRAISSLNGVSCEVGTETQVSVAFQVTNAMEKYSPKFEIYSEN
ILNSLKDITVKGPSLLNANLLDSLWDTFQNKSAARGKVVLLFSDGLDDDVEKLEQKSDEL
RKEGLNALITVALDGPADSSDLADLPYIEFGKGFEYRTQLSIGMRELGSRLSKQLVNVAE
RTCCCLFCKCIGGDGTMGDPGPPGKRGPPGFKGSEGYLGEEGIAGERGAPGPVGEQGTKG
CYGTKGPKGNRGLNGQEGEVGENGIDGLNGEQGDNGLPGRKGEKGDEGSQGSPGKRGTPG
DRGAKGLRGDPGAPGVDSSIEGPTGLKGERGRQGRRGWPGPPGTPGSRRKTAAHGRRGHT
GPQGTAGIPGPDGLEGSLGLKGPQGPRGEAGVKGEKGGVGSKGPQGPPGPGGEAGNQGRL
GSQGNKGEPGDLGEKGAVGFPGPRGLQGNDGSPGYGSVGRKGAKGQEGFPGESGPKGEIG
DPGGPGETGLKGARGKMISAGLPGEMGSPGEPGPPGRKGVKGAKGLASFSTCELIQYVRD
RSPGRHGKPECPVHPTELVFALDHSRDVTEQEFERMKEMMAFLVRDIKVRENSCPVGAHI
AILSYNSHARHLVRFSDAYKKSQLLREIETIPYERSSASREIGRAMRFISRNVFKRTLPG
AHTRKIATFFSSGQSADAHSITTAAMEFGALEIIPVVITFSNVPSVRRAFAIDDTGTFQV
IVVPSGADYIPALERLQRCTFCYDVCKPDASCDQARPPPVQSYMDAAFLLDASRNMGSAE
FEDIRAFLGALLDHFEITPEPETSVTGDRVALLSHAPPDFLPNTQKSPVRAEFNLTTYRS
KRLMKRHVHESVKQLNGDAFIGHALQWTLDNVFLSTPNLRRNKVIFVISAGETSHLDGEI
LKKESLRAKCQGYALFVFSLGPIWDDKELEDLASHPLDHHLVQLGRIHKPDHSYGVKFVK
SFINSIRRAINKYPPINLKIKCNRLNSIDPKQPPRPFRSFVPGPLKATLKEDVLQKAKFF
QDKKYLSRVARSGRDDAIQNFMRSTSHTFKNGRMIESAPKQHD

Region:1-2263
Length:2263aa
Label:Full sequence
Reset:click