Input sequence

Protein name Medium-wave-sensitive opsin 1
Organism Mus musculus Length 359
Disorder content 10.9% ProS content 7.5%
IDEAL NA UniProt O35599

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 359 1-16 17-336 337-359 17-336 1-16 337-359 1-16 349-359 16-309 302-326 16-310 66-317 65-317 16-334 15-359 335-357 50-72 85-107 122-144 164-186 217-239 265-287 297-319 1f88A(2-294) 2e-11 20.2% 1fdfA(1-25) 6e-05 60.0% 1f88A(2-295) 5e-45 19.8% PF00001(1-253) 5e-24 28.68% PF00001 1.8e-47 168.3% 1f88A(2-319) 4e-25 38.82% f.13.1 3.2e-76 254.1%

Sequence

MAQRLTGEQTLDHYEDSTHASIFTYTNSNSTKGPFEGPNYHIAPRWVYHLTSTWMILVVV
ASVFTNGLVLAATMRFKKLRHPLNWILVNLAVADLAETIIASTISVVNQIYGYFVLGHPL
CVIEGYIVSLCGITGLWSLAIISWERWLVVCKPFGNVRFDAKLATVGIVFSWVWAAIWTA
PPIFGWSRYWPYGLKTSCGPDVFSGTSYPGVQSYMMVLMVTCCIFPLSIIVLCYLQVWLA
IRAVAKQQKESESTQKAEKEVTRMVVVMVFAYCLCWGPYTFFACFATAHPGYAFHPLVAS
LPSYFAKSATIYNPIIYVFMNRQFRNCILHLFGKKVDDSSELSSTSKTEVSSVSSVSPA

Region:1-359
Length:359aa
Label:Full sequence
Reset:click