Input sequence

Protein name NPC intracellular cholesterol transporter 1
Organism Mus musculus Length 1277
Disorder content 6.3% ProS content 5.7%
IDEAL NA UniProt O35604

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 1277 1-18 19-248 249-256 257-291 292-319 320-826 827-842 843-970 971-975 976-1263 1264-1277 19-248 257-291 320-826 843-970 976-1263 1-18 292-319 827-842 971-975 1264-1277 1-18 292-311 827-842 971-975 1264-1277 23-247 23-247 572-1252 411-1252 1085-1251 599-785 577-788 1047-1252 8-15 249-259 277-290 1259-1273 269-291 353-375 621-643 656-678 683-705 726-748 763-785 1077-1094 1098-1117 1124-1146 1193-1215 1228-1250 3gkhA(1-225) 2e-119 86.22% 3gkhA(1-225) 9e-79 86.22% PF02460(18-610) 1e-122 38.03% PF02460 2.5e-11 -82.8% 1iwgA7(26-198) 3e-21 16.0% 1iwgA7(24-196) 1e-09 11.05% f.35.1 7e-22 78.8% f.35.1 3.9e-23 83.2%

Sequence

MGAHHPALGLLLLLLCPAQVFSQSCVWYGECGIATGDKRYNCKYSGPPKPLPKDGYDLVQ
ELCPGLFFDNVSLCCDIQQLQTLKSNLQLPLQFLSRCPSCFYNLMTLFCELTCSPHQSQF
LNVTATEDYFDPKTQENKTNVKELEYFVGQSFANAMYNACRDVEAPSSNEKALGLLCGRD
ARACNATNWIEYMFNKDNGQAPFTIIPVFSDLSILGMEPMRNATKGCNESVDEVTGPCSC
QDCSIVCGPKPQPPPPPMPWRIWGLDAMYVIMWVTYVAFLFVFFGALLAVWCHRRRYFVS
EYTPIDSNIAFSVNSSDKGEASCCDPLGAAFDDCLRRMFTKWGAFCVRNPTCIIFFSLAF
ITVCSSGLVFVQVTTNPVELWSAPHSQARLEKEYFDKHFGPFFRTEQLIIQAPNTSVHIY
EPYPAGADVPFGPPLNKEILHQVLDLQIAIESITASYNNETVTLQDICVAPLSPYNKNCT
IMSVLNYFQNSHAVLDSQVGDDFYIYADYHTHFLYCVRAPASLNDTSLLHGPCLGTFGGP
VFPWLVLGGYDDQNYNNATALVITFPVNNYYNDTERLQRAWAWEKEFISFVKNYKNPNLT
ISFTAERSIEDELNRESNSDVFTVIISYVVMFLYISLALGHIQSCSRLLVDSKISLGIAG
ILIVLSSVACSLGIFSYMGMPLTLIVIEVIPFLVLAVGVDNIFILVQTYQRDERLQEETL
DQQLGRILGEVAPTMFLSSFSETSAFFFGALSSMPAVHTFSLFAGMAVLIDFLLQITCFV
SLLGLDIKRQEKNHLDILCCVRGADDGQGSHASESYLFRFFKNYFAPLLLKDWLRPIVVA
VFVGVLSFSVAVVNKVDIGLDQSLSMPNDSYVIDYFKSLAQYLHSGPPVYFVLEEGYNYS
SRKGQNMVCGGMGCDNDSLVQQIFNAAELDTYTRVGFAPSSWIDDYFDWVSPQSSCCRLY
NVTHQFCNASVMDPTCVRCRPLTPEGKQRPQGKEFMKFLPMFLSDNPNPKCGKGGHAAYG
SAVNIVGDDTYIGATYFMTYHTILKTSADYTDAMKKARLIASNITETMRSKGSDYRVFPY
SVFYVFYEQYLTIIDDTIFNLSVSLGSIFLVTLVVLGCELWSAVIMCITIAMILVNMFGV
MWLWGISLNAVSLVNLVMSCGISVEFCSHITRAFTMSTKGSRVSRAEEALAHMGSSVFSG
ITLTKFGGIVVLAFAKSQIFEIFYFRMYLAMVLLGATHGLIFLPVLLSYIGPSVNKAKRH
TTYERYRGTERERLLNF

Region:1-1277
Length:1277aa
Label:Full sequence
Reset:click