Input sequence

Protein name Short-wave-sensitive opsin 1
Organism Homo sapiens Length 348
Disorder content 10.1% ProS content 2.6%
IDEAL NA UniProt P03999

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 348 1-6 7-235 236-239 240-323 324-348 7-235 240-323 1-6 236-239 324-348 236-239 344-348 9-243 288-311 1-342 52-303 51-303 1-347 1-344 244-257 36-58 71-93 108-130 150-172 202-224 251-273 283-305 1f88A(9-242) 2e-14 25.21% 1fdfA(1-24) 0.001 58.33% 1f88A(1-337) 2e-49 23.41% PF00001(1-253) 1e-20 28.29% PF00001 4.2e-72 250.1% 1f88A(1-337) 2e-24 41.43% f.13.1 8.1e-77 256.1%

Sequence

MRKMSEEEFYLFKNISSVGPWDGPQYHIAPVWAFYLQAAFMGTVFLIGFPLNAMVLVATL
RYKKLRQPLNYILVNVSFGGFLLCIFSVFPVFVASCNGYFVFGRHVCALEGFLGTVAGLV
TGWSLAFLAFERYIVICKPFGNFRFSSKHALTVVLATWTIGIGVSIPPFFGWSRFIPEGL
QCSCGPDWYTVGTKYRSESYTWFLFIFCFIVPLSLICFSYTQLLRALKAVAAQQQESATT
QKAEREVSRMVVVMVGSFCVCYVPYAAFAMYMVNNRNHGLDLRLVTIPSFFSKSACIYNP
IIYCFMNKQFQACIMKMVCGKAMTDESDTCSSQKTEVSTVSSTQVGPN

Region:1-348
Length:348aa
Label:Full sequence
Reset:click