Input sequence

Protein name H-2 class II histocompatibility antigen, E-K alpha chain
Organism Mus musculus Length 255
Disorder content 13.7% ProS content 11.4%
IDEAL NA UniProt P04224

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 255 1-24 25-206 207-213 214-244 245-255 25-206 214-244 1-24 245-255 1-24 251-255 26-207 29-206 37-106 120-198 29-109 118-200 30-106 120-207 26-106 105-232 222-238 217-239 1fneA(1-182) 1e-106 100.0% 2fseA(1-178) 1e-50 90.45% PF00993(9-78) 3e-23 65.71% PF07654(3-81) 8e-09 37.97% PF00993 1.7e-40 145.1% PF07654 4.5e-38 137.1% 1a6aA2(1-77) 2e-17 80.52% 1d2oA1(3-86) 4e-17 12.5% d.19.1 2.9e-28 95.6% b.1.1 4.1e-26 80.3%

Sequence

MATIGALVLRFFFIAVLMSSQKSWAIKEEHTIIQAEFYLLPDKRGEFMFDFDGDEIFHVD
IEKSETIWRLEEFAKFASFEAQGALANIAVDKANLDVMKERSNNTPDANVAPEVTVLSRS
PVNLGEPNILICFIDKFSPPVVNVTWLRNGRPVTEGVSETVFLPRDDHLFRKFHYLTFLP
STDDFYDCEVDHWGLEEPLRKHWEFEEKTLLPETKENVVCALGLFVGLVGIVVGIILIMK
GIKKRNVVERRQGAL

Region:1-255
Length:255aa
Label:Full sequence
Reset:click