Input sequence

Protein name Collagen alpha-3(VI) chain
Organism Gallus gallus Length 3137
Disorder content 15.1% ProS content 12.8%
IDEAL NA UniProt P15989

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 3137 1-29 30-431 432-436 437-538 539-543 544-626 627-636 637-1225 1226-1230 1231-1850 1851-1854 1855-2030 2031-2035 2036-2041 2042-2079 2080-2137 2138-2371 2372-2851 2852-2973 2974-3038 3039-3064 3065-3137 30-431 437-538 544-626 637-1225 1231-1850 1855-2030 2036-2041 2080-2137 2372-2851 2974-3038 3065-3137 1-29 432-436 627-636 1226-1230 2031-2035 2042-2079 2138-2371 2852-2973 3039-3064 1-29 432-436 627-636 2031-2035 2042-2079 2138-2371 2852-2886 2892-2898 2905-2920 2930-2935 2958-2973 1033-1226 1439-1622 1237-1425 442-618 241-419 840-1011 642-821 38-191 1639-1826 2399-2800 3070-3124 1033-1232 642-824 1439-1621 442-608 240-433 840-1021 1237-1425 38-216 2625-2812 1637-1824 2393-2596 3070-3124 2092-2197 2172-2225 2960-3049 3072-3122 38-188 241-404 1641-1792 644-795 1239-1395 1441-1596 38-212 241-414 444-616 644-817 842-1014 1035-1207 1239-1410 1441-1614 1641-1814 2043-2102 2103-2162 2171-2229 2230-2289 2310-2369 2407-2588 2625-2816 3071-3123 38-212 1440-1621 839-1016 231-423 429-626 1626-1830 1237-1421 2615-2843 2393-2599 643-827 1034-1216 3070-3122 2043-2225 2963-3048 21-218 235-425 438-630 642-825 842-1020 1029-1218 1233-1421 1435-1618 1640-1820 1837-2035 2400-2599 2618-2812 2955-3046 3068-3122 7-17 25-37 2058-2085 2130-2160 2227-2269 2278-2358 2869-2883 2887-2908 2928-2953 4igiA(1-194) 3e-66 62.37% 4igiA(1-188) 2e-37 43.92% 4igiA(1-190) 1e-35 41.58% 4igiA(1-177) 3e-33 40.45% 4igiA(3-180) 1e-32 38.55% 4igiA(1-172) 2e-31 38.37% 4igiA(1-179) 4e-29 38.89% 4igiA(3-156) 2e-24 41.29% 4igiA(1-187) 5e-20 28.19% 4cn9A(3-367) 1e-11 22.73% 1kthA(3-57) 3e-23 78.18% 4igiA(1-197) 6e-47 61.5% 4igiA(1-182) 5e-34 38.25% 4igiA(1-182) 2e-33 42.08% 4igiA(1-166) 9e-32 41.32% 4igiA(2-194) 4e-31 36.08% 4igiA(1-182) 2e-28 36.81% 4igiA(1-190) 3e-27 41.58% 1lfaA(4-179) 3e-46 21.11% 1lfaA(4-170) 4e-14 12.11% 1ijbA(11-201) 4e-30 20.94% 1ijbA(2-199) 1e-11 16.35% 1ld6A(3-57) 2e-21 30.91% 2pneA(1-76) 1e-10 26.42% 2pneA(2-56) 3e-07 36.36% 2ee3A(13-102) 4e-08 23.33% PF00014(2-52) 7e-13 52.94% PF00092(1-148) 3e-12 32.9% PF00092(1-160) 2e-11 30.95% PF00092(1-148) 3e-10 35.03% PF00092(1-148) 2e-09 32.69% PF00092(1-153) 6e-06 27.54% PF00092(1-150) 0.0003 26.25% PF00092 2.3e-66 231.1% PF00092 3e-58 204.1% PF00092 6.7e-55 193.0% PF00092 2e-58 204.7% PF00092 9.2e-50 175.9% PF00092 2.9e-54 190.9% PF00092 7.4e-46 162.9% PF00092 7.7e-54 189.4% PF00092 9.3e-53 185.9% PF01391 2e-08 38.6% PF01391 2.4e-10 45.0% PF01391 7.5e-06 28.1% PF01391 2.8e-07 34.8% PF01391 3.1e-10 44.6% PF00092 1e-27 102.7% PF00092 8.9e-32 116.2% PF00014 2.4e-27 101.5% 1ao3A(6-179) 2e-29 20.45% 1ao3A(5-186) 4e-21 22.58% 1ao3A(3-184) 1e-17 27.03% 1auqA(7-202) 3e-23 18.0% 1auqA(1-200) 4e-23 16.02% 1auqA(2-208) 8e-22 20.75% 1auqA(15-204) 3e-21 18.56% 1auqA(7-206) 9e-16 14.41% 1auqA(3-207) 2e-11 16.11% 1aoxA(6-200) 2e-24 24.62% 1aoxA(6-199) 1e-22 23.35% 1aalA(3-55) 4e-21 28.3% 1af0A1(8-216) 3e-10 11.68% 1v5jA(15-105) 0.0003 22.58% c.62.1 3.4e-54 179.9% c.62.1 9.9e-48 155.9% c.62.1 3.2e-44 144.5% c.62.1 5.1e-52 170.6% c.62.1 6.6e-41 135.8% c.62.1 5.9e-49 159.9% c.62.1 4.6e-41 134.1% c.62.1 1.6e-44 145.5% c.62.1 3e-43 143.5% c.62.1 1.5e-18 61.5% c.62.1 5.5e-34 114.7% c.62.1 1.4e-31 106.6% b.1.2 1.8e-07 26.1% g.8.1 3e-20 64.2%

Sequence

MRKHRHLPLAAILGLLLSGFCSVGAQQQAAVRNVAVADIIFLVDSSWSIGKEHFQLVREF
LYDVVKALDVGGNDFRFALVQFSGNPHTEFQLNTYPSNQDVLSHIANMPYMGGGSKTGKG
LEYLIENHLTKAAGSRASEGVPQVIIVLTDGQSQDDVALPSSVLKSAHVNMIAVGVQDAV
EGELKEIASRPFDTHLFNLENFTALHGIVGDLVASVRTSMTPEQAGAKGLVKDITAQESA
DLIFLIDGSDNIGSVNFQAIRDFLVNLIESLRVGAQQIHIGVVQYSDQPRTEFALNSYST
KADVLDAVKALSFRGGKEANTGAALEYVVENLFTQAGGSRIEEAVPQILVLISGGESSDD
IREGLLAVKQASIFSFSIGVLNADSAELQQIATDGSFAFTALDIRNLAALRELLLPNIVG
VAQRLILLEAPTIVTEVIEVNKKDIVFLIDGSTALGTGPFNSIRDFVAKIVQRLEVGPDL
IQVAVAQYADTVRPEFYFNTHQNRKDVMANVKKMKLMGGTALNTGSALDFVRNNFFTSAA
GCRMEEGVLPMLVLITGGKSMDAVEQAAAEMKRNRIVILAVGSRNADVAELQEIAHERDF
VFQPNDFRLQFMQAILPEVLSPIRTLSGGMVIHETPSVQVTKRDIIFLLDGSLNVGNANF
PFVRDFVVTLVNYLDVGTDKIRVGLVQFSDTPKTEFSLYSYQTKSDIIQRLGQLRPKGGS
VLNTGSALNFVLSNHFTEAGGSRINEQVPQVLVLVTAGRSAVPFLQVSNDLARAGVLTFA
VGVRNADKAELEQIAFNPKMVYFMDDFSDLTTLPQELKKPITTIVSGGVEEVPLAPTESK
KDILFLIDGSANLLGSFPAVRDFIHKVISDLNVGPDATRVAVAQFSDNIQIEFDFAELPS
KQDMLLKVKRMRLKTGKQLNIGVALDEVMRRLFVKEAGSRIEEGIPQFLVLLAAGRSTDE
VERPSGALKEAGVVTFAIKAKNADLSELERIAYAPQFILNVESLPRISELQANIVNLLKT
IQFQPTVVERGEKKDVVFLIDGSDGVRRGFPLLKTFVERVVESLDIGRDKVRVAIVQYSN
AIQPEFLLDAYEDKADLVSAIQALTIMGGSPLNTGAALDYLIKNVFTVSSGSRIAEGVPQ
FLILLTADRSQDDVRRPSVVLKTSGTVPFGIGIGNADLTELQTISFLPDFAISVPDFSQL
DSVQQAVSNRVIRLTKKEIESLAPDLVFTSPSPVGVKRDVVFLVDGSRYAAQEFYLIRDL
IERIVNNLDVGFDTTRISVVQFSEHPHVEFLLNAHSTKDEVQGAVRRLRPRGGQQVNVGE
ALEFVAKTIFTRPSGSRIEEGVPQFLVILSSRKSDDDLEFPSVQVKQVGVAPMVIAKNMD
PEEMVQISLSPDYVFQVSSFQELPSLEQKLLAPIETLTADQIRQLLGDVTTIPDVSGEEK
DVVFLIDSSDSVRSDGLAHIRDFISRIVQQLDVGPNKVRIGVVQFSNNVFPEFYLRTHKS
KNAVLQAIRRLRLRGGYPVNAGKALDYVVKNYFIKSAGSRIEDGVPQHLVVILGDQSQDD
VNRPANVISSTSIQPLGVGARNVDRNQLQVITNDPGRVLVVQDFTGLPTLERKVQNILEE
LTVPTTEGPVYPGPEGKKQADIVFLLDGSINLGRDNFQEVLQFVYSIVDAIYEDGDSIQV
GLAQYNSDVTDEFFLKDYSSKPEILDAINKVIYKGGRVANTGAAIKHLQAKHFVKEAGSR
IDQRVPQIAFIITGGKSSDDGQGASMEVAQKGVKVFAVGVRNIDLEEVSKLASESATSFR
VSTAQELSELNEQVLVTLAAAMKEKLCPGTTDVTRDCDLDVILGFDVSDVGAGQNIFNSQ
RGLESRVEAVLNRITQMQKISCTGSRAPSVRVAIMAQSRGGPVEGLDFSEYQPELFERFQ
GMRTRGPYFLTAETLKSYQNKFRSAPSGSTKVVIHFTDGTDDYLDQMKTASADLRRQGVH
ALLFVGLDRVKNFEEVMQLEFGRGFTYNRPLRVNLLDLDFELAEQLDNIAERTCCGVPCK
CSGQRGDRGLPGPIGPKGATGEIGYGGYPGDEGGPGERGPPGVNGTQGFQGCPGHRGTKG
SRGFPGEKGELGEMGLDGIDGEEGDKGLPGFSGEKGFSGRRGSKGAKGERGERGDRGLRG
DPGESGADNTQRGTRGQKGEIGQMGEPGPAGQRGQDGGVGRKGMAGRRGPIGVKGTKGAL
GQPGPAGEQGMRGPQGPPGQIGTPGIRGEQGIPGPRAGGGQPGAPGERGRIGPLGRKGEP
GNPGPRGPNGQQGPRGEMGDDGRDGIGGPGPKGRKGERGFVGYPGPKGGPGDRGGAGGPG
PKGNRGRRGNAGNPGTPGQKGEIGYPGPSGLKGDKGPSISQCALVQNIKDKCPCCYGPKE
CPVFPTELAFAIDTSSGVGRDVFNRMKQTVLRVVSNLTIAESNCPRGARVALVTYNNEVT
TEIRFADARKKSSLLQQIQNFQATLTTKPRSLETAMSFVARNTFKRARSGFLMRKVAVFF
SNGETRASPQLNDAVLKLYDAGVTPVFLTSRQDAVLERALEINNTAVGHAIVLPTSGSQL
NDTIRRLLTCHVCLDVCEPDPICGYGSQRPVFRDRRAAPTDVDTDIAFIMDSSASTTPLQ
FNEMKKYISHLVSNMEISSEPKISQHHARVAVLQQAPYDHETNSSFPPVKTEFSLTDYGS
KEKIINYLHNQMTQLYGTMAMGSAVEHTVAHVFESAPNPRDLKVIVLMITGKMEKQELEY
LREAVIDAKCKGYLFVILGIGKNVDVKNIYSLASEPNDVFFKLVSKPGELHEEPLLRFGR
LLPSFIRSDFAFYLSPEIRKQCKWLQADQTPKSPGHTGQKAVYIAPNGTVTQTISTTTTL
STTFKPAASTSAHAKTTTASTTAQTRATERPTESTTVQVNATVQSQGSTAANTKATSRTT
TSTTAAAASGRRRQGAKMNDIQITDVTENSARLRWASPEPHNAYVFDLAITLAHDHSLVL
KQNVTGTERVIGGLRSGQKYLVFITGYLKSQPKVTYTGTFSTKTPAQPKVALANMMLNAE
PLEGPENVMDICLLQKEEGTCRDFVLKWHYDLKTKSCARFWYGGCGGNENRFNTQKECEK
ACSPGNISPGVVTTIGT

Region:1-3137
Length:3137aa
Label:Full sequence
Reset:click