Input sequence

Protein name Tumor necrosis factor receptor superfamily member 1A
Organism Mus musculus Length 454
Disorder content 38.8% ProS content 20.3%
IDEAL NA UniProt P25118

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 454 1-9 10-32 33-50 51-188 189-211 212-234 235-349 350-443 444-454 10-32 51-188 212-234 350-443 1-9 33-50 189-211 235-349 444-454 1-9 33-50 189-194 201-211 235-263 335-349 451-454 42-197 357-441 357-441 44-166 355-410 44-81 84-125 127-166 357-441 42-100 348-451 145-184 101-144 39-100 101-144 145-201 344-453 2-19 213-233 263-276 290-301 10-32 212-234 1extA(1-156) 5e-71 71.15% 1ichA(2-86) 3e-30 71.76% 1ichA(2-86) 1e-23 71.76% 2uwiA(1-123) 7e-16 28.0% PF00531(1-52) 4e-05 44.64% PF00020 2.6e-12 51.5% PF00020 1.7e-14 58.7% PF00020 6.5e-11 46.9% PF00531 5.5e-17 67.0% 1extA1(1-59) 1e-19 76.27% 1ddfA(5-112) 6e-19 19.27% 1ft4B3(1-40) 1e-14 70.0% 1extA2(1-44) 0.0001 63.64% g.24.1 2.3e-15 49.0% g.24.1 1.2e-16 59.0% g.24.1 1.3e-11 42.8% a.77.1 3e-23 77.8%

Sequence

MGLPTVPGLLLSLVLLALLMGIHPSGVTGLVPSLGDREKRDSLCPQGKYVHSKNNSICCT
KCHKGTYLVSDCPSPGRDTVCRECEKGTFTASQNYLRQCLSCKTCRKEMSQVEISPCQAD
KDTVCGCKENQFQRYLSETHFQCVDCSPCFNGTVTIPCKETQNTVCNCHAGFFLRESECV
PCSHCKKNEECMKLCLPPPLANVTNPQDSGTAVLLPLVILLGLCLLSFIFISLMCRYPRW
RPEVYSIICRDPVPVKEEKAGKPLTPAPSPAFSPTSGFNPTLGFSTPGFSSPVSSTPISP
IFGPSNWHFMPPVSEVVPTQGADPLLYESLCSVPAPTSVQKWEDSAHPQRPDNADLAILY
AVVDGVPPARWKEFMRFMGLSEHEIERLEMQNGRCLREAQYSMLEAWRRRTPRHEDTLEV
VGLVLSKMNLAGCLENILEALRNPAPSSTTRLPR

Region:1-454
Length:454aa
Label:Full sequence
Reset:click