Input sequence

Protein name Sodium channel protein type 1 subunit alpha
Organism Homo sapiens Length 2009
Disorder content 27.1% ProS content 20.8%
IDEAL NA UniProt P35498

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 2009 1-6 7-24 25-70 71-468 469-722 723-999 1000-1007 1008-1024 1025-1028 1029-1036 1037-1173 1174-1886 1887-1902 1903-1935 1936-2009 7-24 71-468 723-999 1008-1024 1029-1036 1174-1886 1903-1935 1-6 25-70 469-722 1000-1007 1025-1028 1037-1173 1887-1902 1936-2009 1-6 25-39 49-70 513-518 524-548 556-626 633-655 663-685 698-722 1025-1028 1037-1042 1053-1130 1134-1136 1138-1162 1887-1902 1936-1971 1977-2009 1798-1939 1496-1516 156-176 1790-1942 1496-1516 156-176 1256-1482 157-280 1576-1726 802-979 351-422 522-719 1008-1228 156-422 802-991 1004-1228 1254-1482 1575-1785 1536-1625 764-849 1214-1299 170-270 1589-1666 9-431 751-1043 1086-1491 1494-1813 23-52 431-446 449-466 479-519 649-665 855-867 895-907 980-1002 1081-1091 1130-1155 1162-1178 1314-1329 1638-1650 1760-1778 1837-1849 423-468 125-147 190-212 219-241 251-273 401-423 764-786 799-821 886-908 969-991 1218-1237 1258-1280 1347-1369 1418-1440 1460-1482 1542-1561 1571-1593 1600-1622 1673-1695 1763-1785 4jpzB(1-142) 2e-60 88.03% 1byyA(1-21) 8e-05 100.0% 1qg9A(1-21) 0.0004 95.24% 4dckA(1-153) 1e-46 75.82% 1byyA(1-21) 5e-06 100.0% 1qg9A(1-21) 0.0003 95.24% PF00520(3-198) 3e-35 41.85% PF00520(2-126) 2e-20 40.77% PF00520(2-160) 2e-17 41.36% PF00520(1-186) 3e-13 36.9% PF00520(128-198) 6e-11 44.44% PF11933(40-219) 3e-28 44.5% PF06512(3-219) 2e-24 40.85% PF00520 5.3e-72 249.8% PF00520 5.2e-62 216.6% PF06512 6.9e-128 435.4% PF00520 1e-72 252.1% PF00520 1.6e-65 228.3% 1orsC(1-91) 3e-18 7.69% 1orsC(2-87) 5e-13 11.49% 1orsC(2-85) 2e-10 12.79% 2e9xC1(1-103) 2e-13 12.39% 2e9xC1(1-82) 4e-06 13.41% f.14.1 8.8e-32 110.4% f.14.1 3.3e-31 108.4% f.14.1 1.4e-40 141.0% f.14.1 1.7e-38 133.7%

Sequence

MEQTVLVPPGPDSFNFFTRESLAAIERRIAEEKAKNPKPDKKDDDENGPKPNSDLEAGKN
LPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPLRKI
AIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIIARGFCL
EDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCIQWPPTNASLEEHSIEKNITVNY
NGTLINETVFEFDWKSYIQDSRYHYFLEGFLDALLCGNSSDAGQCPEGYMCVKAGRNPNY
GYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLILA
VVAMAYEEQNQATLEEAEQKEAEFQQMIEQLKKQQEAAQQAATATASEHSREPSAAGRLS
DSSSEASKLSSKSAKERRNRRKKRKQKEQSGGEEKDEDEFQKSESEDSIRRKGFRFSIEG
NRLTYEKRYSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDVGSENDFADDEHSTFED
NESRRDSLFVPRRHGERRNSNLSQTSRSSRMLAVFPANGKMHSTVDCNGVVSLVGGPSVP
TSPVGQLLPEVIIDKPATDDNGTTTETEMRKRRSSSFHVSMDFLEDPSQRQRAMSIASIL
TNTVEELEESRQKCPPCWYKFSNIFLIWDCSPYWLKVKHVVNLVVMDPFVDLAITICIVL
NTLFMAMEHYPMTDHFNNVLTVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIV
TLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAII
VFIFAVVGMQLFGKSYKDCVCKIASDCQLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCM
EVAGQAMCLTVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDNEMNNLQIAVDRMH
KGVAYVKRKIYEFIQQSFIRKQKILDEIKPLDDLNNKKDSCMSNHTAEIGKDLDYLKDVN
GTTSGIGTGSSVEKYIIDESDYMSFINNPSLTVTVPIAVGESDFENLNTEDFSSESDLEE
SKEKLNESSSSSEGSTVDIGAPVEEQPVVEPEETLEPEACFTEGCVQRFKCCQINVEEGR
GKQWWNLRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFT
YIFILEMLLKWVAYGYQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRA
LRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINTT
TGDRFDIEDVNNHTDCLKLIERNETARWKNVKVNFDNVGFGYLSLLQVATFKGWMDIMYA
AVDSRNVELQPKYEESLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFM
TEEQKKYYNAMKKLGSKKPQKPIPRPGNKFQGMVFDFVTRQVFDISIMILICLNMVTMMV
ETDDQSEYVTTILSRINLVFIVLFTGECVLKLISLRHYYFTIGWNIFDFVVVILSIVGMF
LAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLV
MFIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSKPPD
CDPNKVNPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPL
SEDDFEMFYEVWEKFDPDATQFMEFEKLSQFAAALEPPLNLPQPNKLQLIAMDLPMVSGD
RIHCLDILFAFTKRVLGESGEMDALRIQMEERFMASNPSKVSYQPITTTLKRKQEEVSAV
IIQRAYRRHLLKRTVKQASFTYNKNKIKGGANLLIKEDMIIDRINENSITEKTDLTMSTA
ACPPSYDRVTKPIVEKHEQEGKDEKAKGK

Region:1-2009
Length:2009aa
Label:Full sequence
Reset:click