Input sequence

Protein name Sodium channel protein type 4 subunit alpha
Organism Homo sapiens Length 1836
Disorder content 19.1% ProS content 13.7%
IDEAL NA UniProt P35499

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 1836 1-9 10-23 24-59 60-303 304-330 331-492 493-529 530-809 810-817 818-846 847-987 988-1319 1320-1322 1323-1328 1329-1332 1333-1750 1751-1836 10-23 60-303 331-492 530-809 818-846 988-1319 1333-1750 1-9 24-59 304-330 493-529 810-817 847-987 1320-1322 1329-1332 1751-1836 24-45 52-59 304-330 493-529 847-901 909-951 965-973 1320-1322 1329-1332 1751-1762 1769-1783 1801-1809 1829-1836 1602-1754 159-179 1308-1328 1602-1754 1308-1328 159-179 1069-1294 1397-1549 160-280 612-789 373-446 898-1041 159-446 612-801 816-1041 1067-1294 1387-1597 1348-1466 574-659 1027-1113 173-273 283-389 85-455 571-821 1013-1303 1337-1601 479-496 665-677 705-717 790-814 859-890 972-992 1127-1142 1387-1396 1572-1588 1783-1797 1818-1823 451-492 128-150 195-217 224-246 250-272 425-447 574-596 609-631 646-668 697-719 781-803 824-846 1031-1050 1071-1093 1097-1119 1152-1174 1273-1295 1349-1371 1384-1406 1411-1433 1485-1507 1573-1595 4dckA(1-153) 1e-65 77.78% 1qg9A(1-21) 0.0002 100.0% 1byyA(1-21) 0.0002 95.24% 4dckA(1-153) 3e-53 77.78% 1byyA(1-21) 6e-06 95.24% 1qg9A(1-21) 0.0001 100.0% PF00520(3-198) 2e-34 41.15% PF00520(11-171) 5e-21 38.41% PF00520(2-124) 3e-20 39.37% PF00520(1-186) 2e-13 36.9% PF00520(126-198) 9e-11 41.89% PF06512(78-219) 2e-21 41.67% PF00520 2.9e-71 247.3% PF00520 5.4e-62 216.5% PF06512 2.5e-93 320.6% PF00520 1.2e-71 248.6% PF00520 1.1e-63 222.2% 1orsC(1-117) 1e-19 19.83% 1orsC(2-87) 3e-13 11.49% 1orsC(2-86) 2e-10 12.64% 2e9xC1(1-103) 5e-13 12.39% 1dypA(19-134) 2e-06 14.66% f.14.1 4.5e-29 101.0% f.14.1 5.9e-30 104.0% f.14.1 8.8e-38 131.3% f.14.1 9.6e-35 120.7%

Sequence

MARPSLCTLVPLGPECLRPFTRESLAAIEQRAVEEEARLQRNKQMEIEEPERKPRSDLEA
GKNLPMIYGDPPPEVIGIPLEDLDPYYSNKKTFIVLNKGKAIFRFSATPALYLLSPFSVV
RRGAIKVLIHALFSMFIMITILTNCVFMTMSDPPPWSKNVEYTFTGIYTFESLIKILARG
FCVDDFTFLRDPWNWLDFSVIMMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRQKCVRWPPPFNDTNTTWYSNDTW
YGNDTWYGNEMWYGNDSWYANDTWNSHASWATNDTFDWDAYISDEGNFYFLEGSNDALLC
GNSSDAGHCPEGYECIKTGRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAG
KTYMIFFVVIIFLGSFYLINLILAVVAMAYAEQNEATLAEDKEKEEEFQQMLEKFKKHQE
ELEKAKAAQALEGGEADGDPAHGKDCNGSLDTSQGEKGAPRQSSSGDSGISDAMEELEEA
HQKCPPWWYKCAHKVLIWNCCAPWLKFKNIIHLIVMDPFVDLGITICIVLNTLFMAMEHY
PMTEHFDNVLTVGNLVFTGIFTAEMVLKLIAMDPYEYFQQGWNIFDSIIVTLSLVELGLA
NVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ
LFGKSYKECVCKIALDCNLPRWHMHDFFHSFLIVFRILCGEWIETMWDCMEVAGQAMCLT
VFLMVMVIGNLVVLNLFLALLLSSFSADSLAASDEDGEMNNLQIAIGRIKLGIGFAKAFL
LGLLHGKILSPKDIMLSLGEADGAGEAGEAGETAPEDEKKEPPEEDLKKDNHILNHMGLA
DGPPSSLELDHLNFINNPYLTIQVPIASEESDLEMPTEEETDTFSEPEDSKKPPQPLYDG
NSSVCSTADYKPPEEDPEEQAEENPEGEQPEECFTEACVQRWPCLYVDISQGRGKKWWTL
RRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFIMEM
LLKWVAYGFKVYFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRAL
SRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERFDI
SEVNNKSECESLMHTGQVRWLNVKVNYDNVGLGYLSLLQVATFKGWMDIMYAAVDSREKE
EQPQYEVNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKLGGKDIFMTEEQKKYY
NAMKKLGSKKPQKPIPRPQNKIQGMVYDLVTKQAFDITIMILICLNMVTMMVETDNQSQL
KVDILYNINMIFIIIFTGECVLKMLALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKY
FVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFG
MSNFAYVKKESGIDDMFNFETFGNSIICLFEITTSAGWDGLLNPILNSGPPDCDPNLENP
GTSVKGDCGNPSIGICFFCSYIIISFLIVVNMYIAIILENFNVATEESSEPLGEDDFEMF
YETWEKFDPDATQFIAYSRLSDFVDTLQEPLRIAKPNKIKLITLDLPMVPGDKIHCLDIL
FALTKEVLGDSGEMDALKQTMEEKFMAANPSKVSYEPITTTLKRKHEEVCAIKIQRAYRR
HLLQRSMKQASYMYRHSHDGSGDDAPEKEGLLANTMSKMYGHENGNSSSPSPEEKGEAGD
AGPTMGLMPISPSDTAWPPAPPPGQTVRPGVKESLV

Region:1-1836
Length:1836aa
Label:Full sequence
Reset:click