Input sequence

Protein name Collagen alpha-1(XVIII) chain
Organism Homo sapiens Length 1754
Disorder content 72.2% ProS content 51.8%
IDEAL NA UniProt P39060

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 1754 1-19 20-24 25-129 130-134 135-332 333-359 360-364 365-395 396-404 405-448 449-453 454-642 643-1566 1567-1712 1713-1721 1722-1751 1752-1754 20-24 130-134 333-359 365-395 405-448 454-642 1567-1712 1722-1751 1-19 25-129 135-332 396-404 643-1566 1713-1721 1752-1754 1-19 25-34 62-77 104-129 163-172 179-182 224-231 236-246 253-277 284-292 297-307 314-320 396-398 643-672 734-739 749-775 802-917 928-932 938-1238 1244-1368 1388-1451 1459-1496 1528-1537 1542-1551 1557-1562 1713-1721 1752-1754 1572-1749 1442-1496 1572-1749 1441-1496 482-639 1068-1108 1442-1753 37-184 13-195 328-444 817-875 900-958 962-1021 1048-1107 1186-1244 1249-1309 1440-1754 1572-1749 482-650 332-444 331-450 449-660 1578-1749 11-35 79-88 185-199 211-233 238-253 390-409 458-479 652-673 683-701 755-792 801-836 840-874 900-921 930-968 976-1025 1045-1066 1111-1128 1141-1158 1163-1182 1199-1219 1254-1267 1282-1313 1334-1375 1380-1394 1400-1416 1424-1437 1718-1735 1bnlA(1-178) 1e-89 99.44% 3hshA(2-56) 3e-25 100.0% 1bnlA(1-178) 6e-64 99.44% 3hshA(1-56) 3e-21 98.21% 1z78A(31-189) 8e-12 23.49% 2pneA(2-42) 4e-05 46.34% PF06482(1-253) 3e-69 52.88% PF06121(31-191) 1e-25 56.97% PF06121 1.5e-115 394.5% PF01392 2.4e-25 94.8% PF01391 1.8e-05 21.1% PF01391 3.3e-05 16.1% PF01391 1.1e-11 49.4% PF01391 1.9e-11 48.7% PF01391 1.2e-05 24.3% PF01391 0.00016 3.2% PF06482 8.2e-204 687.7% 1bnlA(1-178) 1e-81 99.44% 1z78A1(31-200) 2e-18 20.34% 1ijxA(1-116) 7e-14 30.51% a.141.1 5.9e-28 93.4% b.29.1 1e-21 71.5% d.169.1 1.1e-76 247.4%

Sequence

MAPYPCGCHILLLLFCCLAAARANLLNLNWLWFNNEDTSHAATTIPEPQGPLPVQPTADT
TTHVTPRNGSTEPATAPGSPEPPSELLEDGQDTPTSAESPDAPEENIAGVGAEILNVAKG
IRSFVQLWNDTVPTESLARAETLVLETPVGPLALAGPSSTPQENGTTLWPSRGIPSSPGA
HTTEAGTLPAPTPSPPSLGRPWAPLTGPSVPPPSSGRASLSSLLGGAPPWGSLQDPDSQG
LSPAAAAPSQQLQRPDVRLRTPLLHPLVMGSLGKHAAPSAFSSGLPGALSQVAVTTLTRD
SGAWVSHVANSVGPGLANNSALLGADPEAPAGRCLPLPPSLPVCGHLGISRFWLPNHLHH
ESGEQVRAGARAWGGLLQTHCHPFLAWFFCLLLVPPCGSVPPPAPPPCCQFCEALQDACW
SRLGGGRLPVACASLPTQEDGYCVLIGPAAERISEEVGLLQLLGDPPPQQVTQTDDPDVG
LAYVFGPDANSGQVARYHFPSLFFRDFSLLFHIRPATEGPGVLFAITDSAQAMVLLGVKL
SGVQDGHQDISLLYTEPGAGQTHTAASFRLPAFVGQWTHLALSVAGGFVALYVDCEEFQR
MPLARSSRGLELEPGAGLFVAQAGGADPDKFQGVIAELKVRRDPQVSPMHCLDEEGDDSD
GASGDSGSGLGDARELLREETGAALKPRLPAPPPVTTPPLAGGSSTEDSRSEEVEEQTTV
ASLGAQTLPGSDSVSTWDGSVRTPGGRVKEGGLKGQKGEPGVPGPPGRAGPPGSPCLPGP
PGLPCPVSPLGPAGPALQTVPGPQGPPGPPGRDGTPGRDGEPGDPGEDGKPGDTGPQGFP
GTPGDVGPKGDKGDPGVGERGPPGPQGPPGPPGPSFRHDKLTFIDMEGSGFGGDLEALRG
PRGFPGPPGPPGVPGLPGEPGRFGVNSSDVPGPAGLPGVPGREGPPGFPGLPGPPGPPGR
EGPPGRTGQKGSLGEAGAPGHKGSKGAPGPAGARGESGLAGAPGPAGPPGPPGPPGPPGP
GLPAGFDDMEGSGGPFWSTARSADGPQGPPGLPGLKGDPGVPGLPGAKGEVGADGVPGFP
GLPGREGIAGPQGPKGDRGSRGEKGDPGKDGVGQPGLPGPPGPPGPVVYVSEQDGSVLSV
PGPEGRPGFAGFPGPAGPKGNLGSKGERGSPGPKGEKGEPGSIFSPDGGALGPAQKGAKG
EPGFRGPPGPYGRPGYKGEIGFPGRPGRPGMNGLKGEKGEPGDASLGFGMRGMPGPPGPP
GPPGPPGTPVYDSNVFAESSRPGPPGLPGNQGPPGPKGAKGEVGPPGPPGQFPFDFLQLE
AEMKGEKGDRGDAGQKGERGEPGGGGFFGSSLPGPPGPPGPPGPRGYPGIPGPKGESIRG
QPGPPGPQGPPGIGYEGRQGPPGPPGPPGPPSFPGPHRQTISVPGPPGPPGPPGPPGTMG
ASSGVRLWATRQAMLGQVHEVPEGWLIFVAEQEELYVRVQNGFRKVQLEARTPLPRGTDN
EVAALQPPVVQLHDSNPYPRREHPHPTARPWRADDILASPPRLPEPQPYPGAPHHSSYVH
LRPARPTSPPAHSHRDFQPVLHLVALNSPLSGGMRGIRGADFQCFQQARAVGLAGTFRAF
LSSRLQDLYSIVRRADRAAVPIVNLKDELLFPSWEALFSGSEGPLKPGARIFSFDGKDVL
RHPTWPQKSVWHGSDPNGRRLTESYCETWRTEAPSATGQASSLLGGRLLGQSAASCHHAY
IVLCIENSFMTASK

Region:1-1754
Length:1754aa
Label:Full sequence
Reset:click