Input sequence

Protein name Ligand-gated ion channel 4
Organism Caenorhabditis elegans Length 635
Disorder content 27.4% ProS content 18.6%
IDEAL NA UniProt P54245

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 635 1-27 28-31 32-94 95-444 445-555 556-635 1-27 95-444 556-635 32-94 445-555 32-74 85-94 457-462 474-478 489-529 543-555 124-320 321-409 110-471 124-292 329-443 111-321 328-615 124-320 321-435 109-321 321-627 599-611 323-345 384-406 599-621 4d01A(16-208) 3e-32 35.03% 2lkgA(49-137) 3e-08 35.96% 4pirA(1-354) 5e-43 21.2% PF02931(11-185) 2e-32 38.07% PF02932(2-112) 1e-16 38.26% PF02931 5.6e-83 286.2% PF02932 2.3e-13 55.0% 1i9bA(10-204) 1e-33 21.89% 1oedA(1-116) 7e-27 36.21% b.96.1 6.8e-56 191.6% f.36.1 1.3e-48 172.5%

Sequence

MIICYSCLTVSILLTIKFVPCRFAGIEHQNTKSRVHFSLLDSRQENDTNHFEIAEAKFQK
PHNEENTIGTITKFAPSVQEQHSSAVIPMPHFDQNRLEQALRIKGSIDGTEEALYRSLLD
HTVYEKDVRPCIHHSQPTNVTFGFLLNQIVEMDERNQALTTRSWLNINWMDPRLSWNESL
WSEIKAIYIPHARIWKPDIILVNNAIREYYASLVSTDVMVTSDGNVTWLFSALFRSSCPI
RVRYYPFDDQQCDLKFASWSHDITEINLGLNTDKGDLSSYMNNSEFDLVDMTAVREVVTF
PSDTNSDWPIIVIRIHMHRRPLFYVFNHIVPCVLISSMAVLGFLMPPETGEKINMIITTL
LSMGVYLQSITESIPPTSEGVPLIGMYYVSSLLMVCLATCVNVITLNMHRNGAANQGRHV
PAWMQKWILGYLATFMRMSIREPDSIALLKASQSKKSTIRRSSILRDLKRVKNMSNVRAK
SKEQNANRECECMDPLVHIYAESIMSCLAADTKPMNGSTIREDFASESTFLGRVVSDGIM
PRISASSNSVLTEFETRFRRILKRVYRSLQQHEIREEILDERSRIQWQWQQLASVVDRLL
LCLFCTATLFTIICLLIVPVAYRDNDSMLSFLNFF

Region:1-635
Length:635aa
Label:Full sequence
Reset:click