Input sequence

Protein name Desmocollin-1
Organism Mus musculus Length 886
Disorder content 13.4% ProS content 7.9%
IDEAL NA UniProt P55849

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 886 1-24 25-112 113-127 128-447 448-453 454-676 677-682 683-691 692-714 715-722 723-733 734-740 741-751 752-801 802-886 25-112 128-447 454-676 692-714 723-733 741-751 802-886 1-24 113-127 448-453 683-691 715-722 734-740 752-801 10-24 687-691 715-722 734-740 767-801 136-665 136-667 31-111 246-342 375-462 139-233 247-345 359-463 476-568 130-415 466-568 571-667 34-134 22-167 133-234 230-387 347-464 460-605 571-675 16-26 709-725 692-714 3q2wA(2-541) 4e-95 37.82% 1l3wA(2-532) 4e-104 35.25% PF08758(8-90) 7e-13 43.37% PF00028(1-91) 4e-07 43.3% PF00028(16-91) 0.0003 34.09% PF00028 2.5e-19 74.8% PF00028 7.3e-35 126.4% PF00028 2.4e-29 108.1% PF00028 1e-24 92.8% 2nlzA1(254-529) 1e-35 8.7% 1l3wA4(1-103) 3e-24 31.07% 1l3wA5(1-99) 2e-07 22.77% 1op4A(19-136) 1e-09 22.88% b.1.6 1e-16 58.0% b.1.6 2.5e-13 46.3% b.1.6 5.9e-33 113.8% b.1.6 2.4e-21 79.1% b.1.6 2.9e-25 87.4% b.1.6 2.2e-24 78.1%

Sequence

MAVACAAPGSTFSKQLLFFLLVLVLFCDACQKVSLHVPSHLKAETPVGKVNLEECLKSPS
LILSSDPAFRILEDGTIYTTHDLLLSSEKRGFSILLSDGQGQEQKKLEVVLSAREKKVFR
KRHTKEPVHNRSKRRWAPIPCSLMENSLGPFPQHIQQIQSDAAQNYTIFYSISGPGVDKE
PYNLFYIEKDTGDIYCTRSIDREQYDQFLVYGYATTADGYAPDYPLPLLFKVEDDNDNAP
YFETKLTVFSVPENCRSGTSVGQVTAIDKDEPGTLHTRLKYKILQQIPDQPKHFSIHPDT
GVITTTTPLLDREKCDTYKLVMEVRDMGGQPFGLFTTGTITISLEDENDNSPYFTQTSYT
TEVEENRIDVEILRMVVHDQDLPNTPHSKAVYTILKGNENGNFKITTDPNTNEGVLCVVK
PLNYEVSRQVTLQIGVLNEAQFTNAANAQPPTMCTTTVTVKIKDRDEGPECQPPVKVIQS
KDGLPAGQELLGYKAVDPETSSGEGLRYEMVGDEDNWFEINKITGDLRTVKVLDRESKFV
KNNQYNISVVATDTAGRSCTGTLVVLLEDFNDHPPQIDKEVTICQQEKDFAVLEPIDLDG
PDNGPPFQFLLDNSSSKLWTLESQDGKRAILRQRHNLNYNYYSVPIQIQDRHGFSAKHVL
SVRVCDCTTPTECRMAVKEERDAKPNIILGKWAILAMVLGSALLLCILFTCFCVTTTKRT
VKKCFPDDVAQQNLIVSNTEGPGEEVTEANIRLPTQTANICDTSMSVGTLGGQGIKTQQS
FEMVKGGHTLESHKGGVLGAAEPGRYAYTDWQTFTQPRLGEKVYLCGQAEEHKHCEDYVR
PYNYEGKGSMAGSVGCCSDRQEEEGLEFLDQLEPKFRTLAKTCVKK

Region:1-886
Length:886aa
Label:Full sequence
Reset:click