Input sequence

Protein name MHC class II transactivator
Organism Mus musculus Length 1155
Disorder content 18.6% ProS content 10.1%
IDEAL NA UniProt P79621

Prediction

Order Disorder ProS RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 1155 1-81 82-110 111-134 135-147 148-203 204-357 358-405 406-421 422-674 675-679 680-1152 1153-1155 1-81 111-134 148-203 358-405 422-674 680-1152 82-110 135-147 204-357 406-421 1153-1155 82-100 107-110 136-147 209-217 223-228 233-238 264-271 279-283 303-315 323-330 350-357 406-421 1153-1155 439-757 1022-1109 119-208 443-602 439-610 1022-1110 553-670 409-610 829-1148 26-36 293-307 924-938 1009-1020 1111-1122 4kxfB(71-373) 1e-17 17.58% 4r5dA(353-440) 1e-13 26.14% 4ei0A(155-248) 0.0005 17.02% PF05729(5-153) 5e-09 32.32% PF05729 1.5e-66 231.7% 1pgvA(26-113) 1e-09 16.85% 2j6bA1(3-105) 4e-09 8.33% c.37.1 2.3e-06 20.7% c.10.1 1.6e-26 80.5%

Sequence

MNHFQAILAQVQTLLSSQKPRQVRALLDGLLEEELLSREYHCALLHEPDGDALARKISLT
LLEKGDLDLTFLSWVCNSLQAPTVERGTSYRDHGDHSLCATMDLGSPEGSYLELLNSDAD
PLHLYHLYDQMDLAGEEEIELSSEPDTDTINCDQFSKLLQDMELDEETREAYANIAELDQ
YVFQDTQLEGLSKDLFIEHIGAEEGFGENIEIPVEAGQKPQKRRFPEEHAMDSKHRKLVP
TSRTSLNYLDLPTGHIQIFTTLPQGLWQISGAGTGLSSVLIYHGEMPQVNQVLPSSSLSI
PSLPESPDRPGSTSPFTPSAADLPSMPEPALTSRVNETEDTSPSPCQEGPESSIKLPKWP
EAVERFQHSLQDKYKALPQSPRGPLVAVELVRARLERGSNKSQERELATPDWTERQLAHG
GLAEVLQVVSDCRRPGETQVVAVLGKAGQGKSHWARTVSHTWACGQLLQYDFVFYVPCHC
LDRPGDTYHLRDLLCPPSLQPLAMDDEVLDYIVRQPDRVLLILDAFEELEAQDGLLHGPC
GSLSPEPCSLRGLLAGIFQRKLLRGCTLLLTARPRGRLAQSLSKADAIFEVPSFSTKQAK
TYMRHYFENSGTAGNQDKALGLLEGQPLLCSYSHSPVVCRAVCQLSKALLEQGTEAQLPC
TLTGLYVSLLGPAAQNSPPGALVELAKLAWELGRRHQSTLQETRFSSVEVKTWAVTQGLM
QQTLETTEAQLAFSSFLLQCFLGAVWLAQCNEIKDKELPQYLALTPRKKRPYDNWLEGVP
RFLAGLVFQPRAHCLGALVEPAVAAVADRKQKVLTRYLKRLKLGTLRAGRLLELLHCAHE
TQQPGIWEHVAHQLPGHLSFLGTRLTPPDVYVLGRALETASQDFSLDLRQTGVEPSGLGN
LVGLSCVTSFRASLSDTMALWESLQQQGEAQLLQAAEEKFTIEPFKAKSPKDVEDLDRLV
QTQRLRNPSEDAAKDLPAIRDLKKLEFALGPILGPQAFPTLAKILPAFSSLQHLDLDSLS
ENKIGDKGVSKLSATFPQLKALETLNLSQNNITDVGACKLAEALPALAKSLLRLSLYNNC
ICDKGAKSLAQVLPDMVSLRVMDVQFNKFTAAGAQQLASSLQKCPQVETLAMWTPTIPFG
VQEHLQQLDARISLR

Region:1-1155
Length:1155aa
Label:Full sequence
Reset:click