Input sequence

Protein name RNA polymerase-associated protein CTR9
Organism Caenorhabditis elegans Length 1150
Disorder content 18.3% ProS content 3.0%
IDEAL NA UniProt Q03560

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil 0 1150 1-9 10-921 922-1001 1002-1029 1030-1150 10-921 1002-1029 1-9 922-1001 1030-1150 1-9 922-929 1030-1039 1143-1150 212-346 661-775 320-399 142-253 158-567 638-772 530-677 212-245 355-388 471-504 180-569 474-772 805-886 146-503 524-792 111-123 895-909 933-951 963-996 1003-1023 1038-1046 1053-1126 484-511 858-921 1002-1029 2fo7A(1-129) 4e-07 25.19% 2fo7A(18-130) 8e-05 22.61% 1na0A(3-81) 1e-06 35.37% 1na0A(2-112) 6e-05 24.11% 1w3bA(14-380) 2e-31 18.0% 2fo7A(7-127) 6e-12 22.22% 2fo7A(5-136) 1e-06 20.81% PF00515 3.6e-06 31.1% PF00515 9.4e-06 29.7% PF00515 8.5e-06 29.9% 1w3bA(2-382) 3e-18 16.87% 1w3bA(2-261) 1e-12 15.38% 1nigA(1-82) 3e-11 20.48% a.118.8 1.4e-44 154.8% a.118.8 1.5e-32 112.4%

Sequence

MDESIDDVQETRTIAIPLKDSHEDEVIEINCSELPDGEEVLQILEAEEAKLSYWIEVALE
YYRQDRVDLFMMILESAGSRAGLEYEGVKQDQMRALDILAAYWMTQGYREKAKDKKSDFF
SKATVLFNTADKIAMYEWSHLTVRAWFYLFERDKSTNKYELADQQFNYVVKTNPKNVLPL
IGKAVIAFNKKDYKTAIYYFRKAIRQCRHTIADLRVGIGHCFAKMGMMDKAKTAFERAME
IEPYNVSAMCGLGIILLNTYDHDSLKHAVSLFGRSYNLQTDHPVALIHLANHFFFKKEIE
RAWTLAWHAATYNDCDSIKAEAFYQMGRCRHAQGQFDGAYKYYYQARQANNGEHTLAHYG
LGQMYIHRNEIEEAIKCFDTVHKRLPNNTDTMKILGSLYAHVQLNDPAQTAEARQKGRDV
LGKYLAVENDDYEACIDLAQLLEATDPKRSLELYENAIDLLVTNESIQPQPEMLNNVGAL
YMSMKQYEKAEHHFKRAKERLEEQLNTDEGSLLLERRSAPEKSHLLTIRYNLALCLEHLC
RTVEAEQMYKDIVKECPGYIDGYLRLGCITRDRHQVYESSLWLKQGVQFDQASPIVWTLI
GNLHFAKNEWMPAQKKFEFILSKIFNNKIPDPYSLVALGNVWFEQLLNPSRKKEDEKKYI
DRALQMYQKALKLQPKNMYAANGIGCVLAYKRNWNDARDVFSQVRESTSEFYDVWLNIAH
VCMEREQWMAAVQMYSSAMKKFRKENDSTLQHYLAKAYYRANMLNEAKEALECAMLDQLD
NTQLKFNYAIVLKKSAKEVLRGHKMTSEQVTAAIDDLKFADKIFQYISKNDDRQSSHTGM
RISRTICAEEAKNCKDLLTQAKHKLAAAQTQDEEERRLMEKQEKEKIALQNKMIEEARAK
EEAEKQKLEDMKNLRLSFIEMTKDVLRLPEIVEEKRRGGGGRKRRNDDGDEFVNDSSDAG
NYDGEEGGEDGERRERRKKDKAAKKASRKKRERRDSGGPDSNRRDEKKRKRKEERDRKLQ
EKLSAKQSAKIKSRAFLSSSESSDDDKPKPAADSSDDEVDPRPPVDEFDSPTRTDSDSDR
ETTTKKKKKKAVVDSDEGSVSGSGSGSDNDDKPIIGGSDDDDDDKPAGGNSRDSDGSDAP
KKKVIESDSD

Region:1-1150
Length:1150aa
Label:Full sequence
Reset:click