Input sequence

Protein name Desmocollin-1
Organism Homo sapiens Length 894
Disorder content 13.4% ProS content 8.6%
IDEAL NA UniProt Q08554

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 894 1-25 26-111 112-127 128-446 447-453 454-683 684-691 692-714 715-719 720-725 726-730 731-755 756-809 810-894 26-111 128-446 454-683 692-714 720-725 731-755 810-894 1-25 112-127 447-453 684-691 715-719 726-730 756-809 10-25 684-691 715-719 726-730 756-760 766-803 136-667 136-665 31-111 250-344 139-233 247-345 359-463 476-568 579-665 122-415 466-569 571-667 31-134 30-167 133-234 230-387 347-464 460-605 571-675 16-26 450-459 692-714 3q2wA(2-541) 1e-99 39.67% 3q2wA(2-541) 1e-104 39.85% PF08758(8-90) 1e-12 43.37% PF00028(4-91) 8e-09 42.11% PF00028 6.9e-22 83.3% PF00028 1.4e-32 118.8% PF00028 1.8e-29 108.5% PF00028 5.1e-21 80.4% PF00028 6.2e-08 37.0% 2nlzA1(246-529) 1e-36 8.79% 1l3wA4(1-106) 6e-24 30.84% 1l3wA5(1-99) 2e-10 21.78% 1op4A(15-136) 9e-11 24.59% b.1.6 1.6e-14 50.5% b.1.6 5.9e-15 51.8% b.1.6 5.3e-34 117.4% b.1.6 8.5e-21 77.1% b.1.6 6.1e-24 82.9% b.1.6 1.3e-26 85.1%

Sequence

MALASAAPGSIFCKQLLFSLLVLTLLCDACQKVYLRVPSHLQAETLVGKVNLEECLKSAS
LIRSSDPAFRILEDGSIYTTHDLILSSERKSFSIFLSDGQRREQQEIKVVLSARENKSPK
KRHTKDTALKRSKRRWAPIPASLMENSLGPFPQHVQQIQSDAAQNYTIFYSISGPGVDKE
PFNLFYIEKDTGDIFCTRSIDREKYEQFALYGYATTADGYAPEYPLPLIIKIEDDNDNAP
YFEHRVTIFTVPENCRSGTSVGKVTATDLDEPDTLHTRLKYKILQQIPDHPKHFSIHPDT
GVITTTTPFLDREKCDTYQLIMEVRDMGGQPFGLFNTGTITISLEDENDNPPSFTETSYV
TEVEENRIDVEILRMKVQDQDLPNTPHSKAVYKILQGNENGNFIISTDPNTNEGVLCVVK
PLNYEVNRQVILQVGVINEAQFSKAASSQTPTMCTTTVTVKIIDSDEGPECHPPVKVIQS
QDGFPAGQELLGYKALDPEISSGEGLRYQKLGDEDNWFEINQHTGDLRTLKVLDRESKFV
KNNQYNISVVAVDAVGRSCTGTLVVHLDDYNDHAPQIDKEVTICQNNEDFAVLKPVDPDG
PENGPPFQFFLDNSASKNWNIEEKDGKTAILRQRQNLDYNYYSVPIQIKDRHGLVATHML
TVRVCDCSTPSECRMKDKSTRDVRPNVILGRWAILAMVLGSVLLLCILFTCFCVTAKRTV
KKCFPEDIAQQNLIVSNTEGPGEEVTEANIRLPMQTSNICDTSMSVGTVGGQGIKTQQSF
EMVKGGYTLDSNKGGGHQTLESVKGVGQGDTGRYAYTDWQSFTQPRLGEKVYLCGQDEEH
KHCEDYVCSYNYEGKGSLAGSVGCCSDRQEEEGLEFLDHLEPKFRTLAKTCIKK

Region:1-894
Length:894aa
Label:Full sequence
Reset:click