Input sequence

Protein name Transcriptional repressor CTCF
Organism Gallus gallus Length 728
Disorder content 48.4% ProS content 35.3%
IDEAL NA UniProt Q08705

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 728 1-64 65-78 79-91 92-124 125-262 263-581 582-715 716-725 726-728 65-78 92-124 263-581 716-725 1-64 79-91 125-262 582-715 726-728 1-64 79-86 125-141 149-180 188-198 208-233 241-262 582-599 607-621 646-658 670-690 709-715 726-728 515-581 399-462 277-425 469-546 277-425 394-462 513-579 472-541 266-288 294-316 322-345 351-373 379-401 437-460 523-546 555-577 271-536 510-573 276-320 318-374 375-432 433-489 491-546 554-584 116-131 202-211 250-264 582-661 682-713 1x6hA(8-74) 7e-36 97.01% 2ct1A(8-71) 1e-34 100.0% 2i13A(3-147) 2e-28 37.58% 2rsjA(12-88) 4e-13 42.31% 2i13A(3-147) 5e-35 37.58% 2ct1A(3-71) 5e-27 92.75% 1x6hA(6-72) 1e-26 95.52% 1g2fC(12-81) 1e-16 35.71% PF00096 1.2e-05 29.4% PF00096 6e-05 27.1% PF00096 7e-06 30.1% PF00096 0.00053 23.9% PF00096 0.00013 26.0% PF00096 0.00075 23.4% PF00096 0.00031 24.7% PF00096 3.4e-05 27.9% 1fs7A(206-446) 7e-22 10.74% 1vd4A(2-58) 9e-09 15.62% g.37.1 1.6e-13 45.5% g.37.1 3.6e-12 45.2% g.37.1 7e-12 44.2% g.37.1 0.00051 16.3% g.37.1 1.4e-12 46.6% g.37.1 4.6e-05 19.2%

Sequence

MEGEAVEAIVEESETFIKGKERKTYQRRREGGQEDEACHIAPNQADGGEVVQDVNSGVQM
VMMEHLDPTLLQMKTEVMEGAVPQETEATVDDTQIITLQVVNMEEQPINLGELQLVQVPV
PVTVPVATTSVEELQGAYENEVSKGGLQEGEPMICHTLPLPEGFQVVKVGANGEVETLEQ
GELQPQEDPNWQKDPDYQPPAKKTKKNKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEV
NAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCG
RAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYAS
VEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSG
TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERY
ALIQHQKSHKNEKRFKCDQCDYACRQERHMVMHKRTHTGEKPYACSHCDKTFRQKQLLDM
HFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCSGLDGGEGENGGETKKGKRGRKR
KMRSKKEDSSDSEENAEPDLDDNEDEEETAVEIEAEPEVSAEAPAPPPSKKRRGRPPGKA
ATQTKQSQPAAIIQVEDQNTGEIENIIVEVKKEPDAETVEEEEEAQPAVVEAPNGDLTPE
MILSMMDR

Region:1-728
Length:728aa
Label:Full sequence
Reset:click