Input sequence

Protein name Protein patched homolog 1
Organism Caenorhabditis elegans Length 1408
Disorder content 12.9% ProS content 6.2%
IDEAL NA UniProt Q09614

Prediction

Order Disorder ProS RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 1408 1-51 52-138 139-150 151-194 195-199 200-683 684-690 691-838 839-879 880-1202 1203-1208 1209-1344 1345-1408 52-138 151-194 200-683 691-838 880-1202 1209-1344 1-51 139-150 684-690 839-879 1203-1208 1345-1408 1-32 41-51 139-150 684-690 850-855 1203-1208 1345-1348 1374-1378 1387-1391 595-974 1076-1311 452-1335 1182-1312 687-819 611-819 1139-1335 33-53 258-271 298-322 468-484 1314-1330 1341-1356 1360-1376 1387-1404 652-671 691-713 717-739 765-787 797-816 905-922 1180-1202 1209-1231 1241-1263 1276-1298 1308-1330 PF02460(14-341) 2e-46 30.53% PF02460(361-587) 2e-27 30.25% PF02460 4.7e-09 -180.6% 1iwgA7(40-176) 5e-12 13.87% 1iwgA7(63-199) 6e-08 15.94% f.35.1 2.8e-19 69.5% f.35.1 8.5e-23 82.0%

Sequence

MLTLLEPPGAKRSPTVGNYNNRSAQHLLNLAPEEDDLYETYEETEDYAENEPTGNILTRS
FQFLDQYLVGQSSSADYNDRWKREFRARPSWCDADLCLQQMNRGKATGNRYALYSRSLIQ
KLLFALGNTVHRNAWSIILAVSMIFAVCCYGLQYVHIETDIVKLWVAQGGRLDEELNFLP
NIKEAMRNVTGDSGPELPRENGLGGGYQVLIQTPEYEGQDALAAGPLLKHVEIMKHIASF
NVSVHGVDWSLSDICFKPAPPSVAADSAASSLGDVIDKIVPCIWITPIDCFWEGSKALGP
HPSLPKSSLGPLGMLLSSLSDGDMIRWSDFDPIAVIDEIHRSFNLGSHYTFFERAGVSHG
YMDRPCIDPLDPECPPMAKNYFDVCPHIDRVREIAKKYGTELEEEKKKDSGYSFFDFLGR
KKREAGDQPKMIHPAQPADSIPTIEDAVPAQVPVSTAPIPTTTTLSPEEARAAEEKEKKQ
KARELKDYCKSYRKSAFEWLKKNKDKWPEVMSENMYPQNVDYAAEMTGGCSGFASNVLNW
PEDMILGNPRRAKKGGKLSGADALQSVFLVASPADVFLRFKQKPGRNSMKTGLDMDAWNE
TAAEQVLQAWQRNFTKSLYNHKANVDEDGNERRTLHPLASTSIADMLEEFCQFNYTIILA
GYALMLAYAIVTQARFDNCLPATESSMGLALAGVLVVTFASVAGLGLATWFGIEFNAATT
QIVPFLTLGIGVDNMFMLLHNYRDVVKLAGGHAEMAILMRETGMSILCTSINNILSFLTG
TLLPIPALRSFCAQSSILLTFNFIAILTIYPAIISIDLRRKKAQRRDLVCCLYGDTREES
YSMISKPKIQSKRIIGAPSEASIMQQFDGITQAQMASSDDPAPWSLHSFIRYYYIPFISK
PASKVAIIVGCCALLGASFIGMRQSTLGLELGDVLPEHTAPAQFLRARDKYFSFYPMFAV
IKGPNIDYAHQQRQIDNYRQSIGSSKYVIKNKNEEPSEKYWLGLMRDWLISIQRGFDEEV
AKGSFNLTSGTVIGSNVSEDARLAHALMCSHGSLFGCAGRVGKIRLVDASGIINSDGFYN
YLTAWFNVDHMMYYVSQASFFPTPPKWELSKNHTENFIPAAEPLAYSQIPFYLTGLTDTA
VIVDAIKDIRSVCERFTDQGLPNFPQGIAFTFWEQYLFLTGNLMQAISIITISVFCVISV
LLFNPWAALMVVCILGIMTCELAGFMGLVGIKLNPVSAVTLITAVGIGVEFTVHVVVSFL
TALGTRSQRTSSAVDRVFVPVIHGSFSTLLGILMLGFSEFEFVVKYFFIVMTALICIGII
NGLILLPVLLSWFGPRREISPTGGKTTLTLPPPLPKNANSSRSGGDDSDEDDEPSGLVMY
SRQAPPTTRTSGGNRGTVGNNTRRLPAV

Region:1-1408
Length:1408aa
Label:Full sequence
Reset:click