Input sequence

Protein name Semaphorin-1A
Organism Caenorhabditis elegans Length 712
Disorder content 22.2% ProS content 17.4%
IDEAL NA UniProt Q17330

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 712 1-20 21-198 199-205 206-551 552-579 580-602 603-712 21-198 206-551 580-602 1-20 552-579 603-712 1-20 552-558 565-579 603-651 680-712 64-544 49-546 57-465 497-528 55-480 496-547 57-494 497-548 28-495 496-549 578-596 616-627 580-602 3afcA(41-529) 2e-73 34.9% 3afcA(26-531) 1e-64 32.7% PF01403(4-405) 5e-77 43.03% PF01437(2-33) 0.0002 46.88% PF01403 1.6e-201 680.0% PF01437 1e-15 62.8% 1olzA2(31-473) 2e-95 32.03% 1olzA3(2-54) 5e-05 32.14% b.69.12 1.3e-133 416.9% g.16.2 9.5e-13 40.8%

Sequence

MRRILTLLLLFNVVRSSEAITGGVVNLRPKQIINSVGIGDRFGGIGTSSDESDHFKLLAA
DGDSLLVGARNAVYNLSLSTLSVNHKIDWKPPAEHIEECIMKGKSKTDCQNYIRVLARKS
AGVSLVCGTHAFSPKCREYTVTEFGIRNTRQFDGQGISPYDPKHNSSALYVPGTNQLFVA
TVTDFVGNDALIYRKTIDETPSSKSAANIRTQSYDARVLNAPNFVATFAYKEHVYFWFRE
IASEAIDNNEEPQIYARVARVCKNDKGGARPANERWTSYLKARLNCSLPSGSSPFYFNEL
KAVSDPIDAGNNNHVVYTVFSTPDSDVRMSAVCKFSMKKIREEFDNGTFKHQNNAQSMWM
AFNRNEVPKPRPGSCSPDSTKLPENTVSFILHHPLLHRPIPSVAAPLLVEGADRADLTQI
TVLPRVRAVGGHNYDILFIGTSDGKVLKVVEVDGNATVIQSATVFQRGVPIVNLLTTKES
VVIVSADEIASLPVHNCAQQTSCSKCVQLQDPHCAWDSSIARCVHGGSWTGDQFIQNMVF
GQSEQCPEGIIVREVFDDNESEAQPEAVSRSGYPKEHSTITVVLVAAVASLISLIIGAFI
GIRVNRWAATSEPHRSASSTSGSDYDSFGRARLTRHDSLTTATKVDHGFVPQSKQSVDAT
SLVMSINATHHPMSMSQHGSGINTPSRDKNAIVTSINQNTLPRDYKVKKVYL

Region:1-712
Length:712aa
Label:Full sequence
Reset:click