Input sequence

Protein name Transient receptor potential cation channel subfamily A member 1 homolog
Organism Caenorhabditis elegans Length 1211
Disorder content 1.2% ProS content 1.2%
IDEAL NA UniProt Q18297

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 1211 1-1144 1145-1147 1148-1199 1200-1211 1-1144 1148-1199 1145-1147 1200-1211 1145-1147 1200-1211 56-660 543-810 934-1117 41-654 507-810 934-1117 83-115 173-205 206-238 378-410 473-505 540-572 873-1068 175-611 51-260 536-773 22-262 281-531 467-660 843-857 969-985 1148-1192 813-832 896-918 933-952 973-995 1047-1069 4rlvA(56-627) 8e-35 25.61% 3j9pD(3-254) 2e-08 24.47% 3j9pD(337-516) 1e-05 24.32% 4rlvA(41-654) 3e-56 21.64% 3j9pD(1-254) 9e-33 23.15% 3j9pD(337-516) 4e-29 24.32% PF00023 1.5e-08 39.0% PF00023 2.5e-06 31.6% PF00023 1.5e-05 29.0% PF00023 1.6e-07 35.6% PF00023 2.6e-06 31.6% PF00023 1e-07 36.2% PF00520 3.1e-20 77.8% 1n11A(1-401) 1e-46 22.85% 1s70B(74-284) 1e-22 25.82% 1sw6A(10-244) 5e-10 10.74% d.211.1 1.2e-45 144.0% d.211.1 2.1e-50 159.2% d.211.1 3.2e-49 159.5%

Sequence

MSKKSLGLDVRLELEGLISNDDTIRSEKDGRQASIFRVAELDARTEADNLRSIIHQSARE
GNVNALQEALLKAPLAVNAQDGDFMTPLHYAARYGNYDAVKLLLSKNALPNTKNREGDTP
LHIASKYIYGYSDICSIIDEDQADSARKYNTATKKIINALVSENAEIDPVNKYQLTPLHY
AAMKSNFSALHALIKLKADVDAEDDNKMTPLLLACVHGSQEIIQELIKANSNVTKRDQRL
NTVFHIVALRGEPEYLEMMMDHDPVEAIKALNLFNNEKKTPLRMAVEGNHPETLKKILQM
EKKNSCKWMDREKELIHFAAEKGFLEVLKALVEAGGNKNELNEVKAVPLHVAAQMNQLEV
VSYLIEEEKDNIDVVDEQGLTPLMMAVTHDSKKCVEYLIAKKANLTITDKDERTPVFIGA
KFNALSSVEYILDHLRKKNKETERSALKSPTRNTLRIVSEDVRRTMVNMVDRDQNTPMHI
VASNGYLEMMQLLQKHGASITQVNEDEETALHRAAIGGQTGAVRQLLEWDIRLLLMKDEM
GNSALHLAARSGHDATTKVLLDNGADKEAKNSYQKTPLQVAVDSGKLETCQRLVAKGAQI
ESSSDTKTVLHTAAFYGNESIVRYFIAEGVTIDRRDEEGKTAFDIACENDHKDVARAFLE
TDQWKNLMIPCDVIPLDKHRNPVNMKRRTPFRTLLTKFPELASFVMDNCIEKSKEETDST
QSVAYNFEFLDDTYMMRCVSDDGTGEQLIGCKSAYDEDFKLEKDAQSYASNYDRVYKYHP
LKLMADAEKLHLLNHPLSKALLKYKWNRLGRPMYYFALFMYLVFIVSLTQYVRHTKAPYN
VWNEESYYDSEYFDENETCPQINTTKPDVVWKIIIQTLAVCQILVECFQLFQRKFAYLVN
WENWIDCFIYSTALITVYDFSECSATSGVRQNWQWILAALCIFFGWINLLFMIRKMPRFG
IFVVMFVDIVKTFFRFFPVFVLFIIAFSSSFYVILQNRPEFSTIFMSPLKTTVMMIGEFE
FTGIFHGDETTHAEKMFGPAHTAVACALFFFFCIIMTILLMNLLVGLAVDDIKGVQEKAE
LKRLAMQVDLVLQIEASLHFFIQRTKKYATCRYATFPYGKLHKTGFAGWWSNFRRRFGLS
VSTDPEIDEMYEREAEFTSEMTQKLQNQAAKLKNIQENIDVMYEKQVRLEAIIAKLATGL
NINIELEEKDN

Region:1-1211
Length:1211aa
Label:Full sequence
Reset:click