Input sequence

Protein name NPC intracellular cholesterol transporter 1 homolog 1
Organism Caenorhabditis elegans Length 1383
Disorder content 10.8% ProS content 8.9%
IDEAL NA UniProt Q19127

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 1383 1-14 15-216 217-223 224-305 306-327 328-653 654-659 660-825 826-833 834-849 850-855 856-996 997-1000 1001-1293 1294-1383 15-216 224-305 328-653 660-825 834-849 856-996 1001-1293 1-14 306-327 654-659 826-833 850-855 997-1000 1294-1383 1-14 306-313 323-327 654-659 829-833 850-855 997-1000 1294-1309 1319-1357 1364-1383 58-252 17-251 568-1283 366-1285 1111-1282 586-803 1086-1285 854-869 283-305 356-373 630-652 665-687 697-719 740-762 777-799 856-878 1129-1151 1164-1184 1189-1211 1223-1245 1260-1282 3gkhA(34-222) 2e-18 27.64% 3qntA(7-238) 2e-33 26.34% PF02460(9-609) 2e-57 26.4% PF02460 1.8e-06 -291.4% 1iwgA7(19-196) 3e-11 17.32% f.35.1 6.9e-09 32.6% f.35.1 5.7e-10 36.5%

Sequence

MKQLLIFCLLFGSIFHHGDAGCIMRGLCQKHTENAYGPCVTNDTNVEPTAFDKTHPAYEK
MVEFCPHLLTGDNKLCCTPSQAEGLTKQIAQARHILGRCPSCFDNFAKLWCEFTCSPNQQ
DFVSISEMKPIEKKEGFTPEYQPAEAYVNTVEYRLSTDFAEGMFSSCKDVTFGGQPALRV
MCTSTPCTLTNWLEFIGTQNLDLNIPIHTKFLLYDPIKTPPSDRSTYMNVNFTGCDKSAR
VGWPACSTSECNKEEYANLIDLDDGKTSGQTCNVHGIACLNIFVMLAFIGSLAVLLCVGF
VFTSYDEDYTNLRQTQSGEESPKRNRIKRTGAWIHNFMENNARDIGMMAGRNPKSHFFIG
CAVLIFCLPGMIYHKESTNVVDMWSSPRSRARQEEMVFNANFGRPQRYQQIMLLSHRDFQ
SSGKLYGPVFHKDIFEELFDILNAIKNISTQDSDGRTITLDDVCYRPMGPGYDCLIMSPT
NYFQGNKEHLDMKSNKEETVSEDDDAFDYFSSEATTDEWMNHMAACIDQPMSQKTKSGLS
CMGTYGGPSAPNMVFGKNSTNHQAANSIMMTILVTQRTEPEIQKAELWEKEFLKFCKEYR
EKSPKVIFSFMAERSITDEIENDAKDEIVTVVIALAFLIGYVTFSLGRYFVCENQLWSIL
VHSRICLGMLSVIINLLSSFCSWGIFSMFGIHPVKNALVVQFFVVTLLGVCRTFMVVKYY
AQQRVSMPYMSPDQCPEIVGMVMAGTMPAMFSSSLGCAFSFFIGGFTDLPAIRTFCLYAG
LAVLIDVVLHCTIFLALFVWDTQRELNGKPEFFFPYQIKDLLGAYLIGRQRATDTFMTQF
FHFQVAPFLMHRMTRIITGIIFIASFITTVILSSKISVGFDQSMAFTEKSYISTHFRYLD
KFFDVGPPVFFTVDGELDWHRPDVQNKFCTFPGCSDTSFGNIMNYAVGHTEQTYLSGEMY
NWIDNYLEWISRKSPCCKVYVHDPNTFCSTNRNKSALDDKACRTCMDFDYVANSYPKSSI
MYHRPSIEVFYRHLRHFLEDTPNSECVFGGRASFKDAISFTSRGRIQASQFMTFHKKLSI
SNSSDFIKAMDTARMVSRRLERSIDDTAHVFAYSKIFPFYEQYSTIMPILTTQLFITVVG
VFGIICVTLGIDVKGAACAVICQVSNYFHIVAFMYIFNIPVNALSATNLVMSSGILIEFS
VNVLKGYACSLRQRAKDRAESTVGSIGPIILSGPVVTMAGSTMFLSGAHLQIITVYFFKL
FLITIVSSAVHALIILPILLAFGGSRGHGSSETSTNDNDEQHDACVLSPTAESHISNVEE
GILNRPSLLDASHILDPLLKAEGGIDKAIDIITIDRSYPSTPSSLPCTSRMPRAHIEPDL
RSL

Region:1-1383
Length:1383aa
Label:Full sequence
Reset:click