Input sequence

Protein name Glutamate receptor ionotropic, kainate 1
Organism Mus musculus Length 836
Disorder content 6.9% ProS content 6.0%
IDEAL NA UniProt Q60934

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 836 1-26 27-138 139-142 143-417 418-421 422-804 805-836 27-138 143-417 422-804 1-26 805-836 1-26 805-828 36-507 664-758 461-564 37-725 560-715 443-506 57-379 53-397 560-794 432-546 663-759 56-406 573-665 30-411 433-732 44-55 111-121 256-269 799-817 563-582 639-661 724-746 4uqqA(3-461) 0.0 74.84% 4uqqA(540-632) 9e-22 58.95% 4tllB(408-506) 2e-18 41.35% 3kg2A(3-652) 2e-81 31.58% PF00060(1-150) 8e-47 57.69% PF10613(1-64) 2e-21 67.19% PF01094(4-308) 6e-15 24.92% PF01094 4.3e-75 260.0% PF00060 1.8e-66 231.4% 1ftjA(1-116) 4e-36 58.62% 1ftjA(113-202) 1e-07 35.05% 1peaA(22-349) 5e-23 10.67% 1bl8A(8-97) 2e-07 19.79% c.93.1 1.6e-69 241.9% c.94.1 4.1e-38 135.6%

Sequence

MERGTVLIQPGLWTRDTSWTLLYFLCYILPQTSPQVLRIGGIFETVENEPVNVEELAFKF
AVTSINRNRTLMPNTTLTYDIQRINLFDSFEASRRACDQLALGVAALFGPSHSSSVSAVQ
SICNALEVPHIQTRWKHPSVDNRDLFYINLYPDYAAISRAVLDLVLYYNWKTVTVVYEDS
TGLIRLQELIKAPSRYNIKIKIRQLPSGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEIL
KQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSME
RLQAPPRPETGLLDGVMTTEAALMYDAVYMVAIASHRASQLTVSSLQCHRHKPWRLGPRF
MNLIKEARWDGLTGRITFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDGNRD
RSNNITDSLANRTLIVTTILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYD
VKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISI
LYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSD
VVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLT
VERMESPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQPSALGVE
NIGGIFIVLAAGLVLSVFVAIGEFIYKSRKNNDIEQKGKSSRLRFYFRNKVRFHGSKTES
LGVEKCLSFNAIMEELGISLKNQKKIKKKSRTKGKSSFTSILTCHQRRTQRKETVA

Region:1-836
Length:836aa
Label:Full sequence
Reset:click