Input sequence

Protein name Collagen alpha-1(II) chain
Organism Xenopus tropicalis Length 1492
Disorder content 83.9% ProS content 80.7%
IDEAL NA UniProt Q6P4Z2

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP SEG:LCR 0 1492 1-49 50-54 55-1257 1258-1492 50-54 1258-1492 1-49 55-1257 1-26 32-49 55-93 109-186 208-1229 1237-1257 1277-1492 36-101 532-620 1277-1492 35-101 520-589 1274-1491 38-93 38-93 122-181 204-262 263-322 323-382 383-442 443-502 503-562 563-622 623-682 683-742 743-802 806-865 866-925 926-985 986-1045 1046-1105 1106-1165 1166-1225 1274-1491 1234-1435 36-101 1284-1355 122-140 158-182 196-266 302-377 395-416 419-456 479-518 590-605 626-638 644-693 701-741 794-818 833-851 860-884 893-936 958-986 1022-1037 1067-1086 1096-1121 1139-1222 4ae2A(1-212) 1e-93 69.44% 1u5mA(8-73) 4e-28 75.76% 2pneA(2-79) 1e-05 43.82% 4ae2A(1-212) 3e-62 69.44% 1u5mA(7-73) 4e-19 74.63% 2pneA(5-75) 4e-06 40.85% PF01410(1-209) 5e-88 71.56% PF00093(1-55) 7e-06 42.86% PF00093 2.8e-23 87.9% PF01391 1.2e-09 42.7% PF01391 9.9e-11 46.2% PF01391 3e-16 64.6% PF01391 2.4e-16 64.9% PF01391 1.1e-13 56.1% PF01391 1.5e-14 58.9% PF01391 5.6e-12 50.4% PF01391 1.2e-15 62.6% PF01391 2.9e-15 61.3% PF01391 5.9e-14 57.0% PF01391 3e-18 71.2% PF01391 1.9e-15 61.9% PF01391 1.1e-13 56.1% PF01391 1.4e-10 45.8% PF01391 4e-12 50.9% PF01391 5e-13 53.9% PF01391 7.9e-16 63.2% PF01391 1.8e-06 32.1% PF01410 3.7e-169 572.5% 1j83A(6-179) 3e-44 9.71% 1u5mA(8-73) 1e-14 75.76% d.171.1 0.00033 11.8%

Sequence

MFSFVDSRTLVLFAATQVILLAVVRCQDEEDVLATGSCVQHGQRYSDKDVWKPEPCQICV
CDTGNVLCDEIICEDPKDCPNAEIPFGECCPICPTEQSSTSSGQGVLKGQKGEPGDIKDV
VGPKGPPGPQGPSGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPVGPPGPPGPPGL
GGNFAAQMTGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPTGAPGPQGFQGNPGEPGEPGA
GGPMGPRGPPGPAGKPGDDGEAGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGL
DGSKGEAGAAGAKGEGGATGEAGSPGPMGPRGLPGERGRPGASGAAGARGNDGLPGPAGP
PGPVGPAGAPGFPGAPGSKGEAGPTGARGPEGAQGPRGESGTPGSPGPAGASGNPGTDGI
PGAKGSSGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGDPGVAGFKGEHGPKGEIGS
AGPQGAPGPAGEEGKRGARGEPGAAGPLGPPGERGAPGNRGFPGQDGLAGPKGAPGERGV
PGLGGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGASGEDGRPGPPGPQGA
RGQPGVMGFPGPKGANGEPGKAGEKGLLGAPGLRGLPGKDGETGAQGPNGPAGPAGERGE
QGPPGPSGFQGLPGPPGSPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSSGPQGL
QGPRGLPGTPGTDGPKGATGPSGPNGAQGPPGLQGMPGERGAAGISGPKGDRGDTGEKGP
EGAPGKDGSRGLTGPIGPPGPSGPNGEKGESGPSGPAGIVGARGAPGDRGETGPPGPAGF
AGPPGADGQAGLKGDQGESGQKGDAGAPGPQGPSGAPGPQGPTGVNGPKGARGAQGPPGA
TGFPGAAGRVGPPGPNGNPGPSGAPGSAGKEGPKGARGDAGPTGRAGDPGLQGPAGVPGE
KGESGEDGPSGPDGPPGPQGLSGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGGPGSAGD
RGPPGPVGPPGLTGPAGEPGREGNAGSDGPPGRDGATGIKGDRGETGPLGAPGAPGAPGA
PGPVGPTGKQGDRGESGPQGPLGPSGPAGARGLPGPQGPRGDKGEAGEAGERGQKGHRGF
TGLQGLPGPPGTAGDQGASGPAGPGGPRGPPGPVGPSGKDGSNGLPGPIGPPGPRGRGGE
TGPAGPPGQPGPPGPPGPPGPGIDMSAFAGLSQPEKGPDPMRYMRADQASSSVPQRDVDV
EATLKSLNNQIESIRSPDGTKKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTVDAIKVFC
NMETGETCVYPNPSKIPKKNWWSAKGKEKKHIWFGETINGGFQFSYGDDSSAPNTANIQM
TFLRLLSTDATQNITYHCKNSIAFMDEASGNLKKAVLLQGSNDVEIRAEGNSRFTYNALE
DGCKKHTGKWSKTVIEYRTQKTSRLPIVDIAPMDIGGADQEFGVDIGPVCFL

Region:1-1492
Length:1492aa
Label:Full sequence
Reset:click