Input sequence

Protein name Cadherin-related family member 1
Organism Mus musculus Length 859
Disorder content 2.0% ProS content 1.0%
IDEAL NA UniProt Q8VHP6

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 859 1-9 10-760 761-765 766-796 797-799 800-807 808-859 10-760 766-796 808-859 1-9 800-807 1-9 233-677 23-215 122-327 142-677 42-241 482-553 142-237 40-126 140-238 252-345 478-568 181-627 43-315 569-688 38-128 129-239 235-395 349-465 461-606 571-679 94-112 734-745 789-799 817-829 703-725 3q2wA(94-540) 3e-25 26.61% 2wcpA(9-187) 1e-22 39.9% 2a62A(93-297) 2e-15 29.11% 3q2wA(7-540) 9e-66 21.95% 2wcpA(18-208) 7e-42 37.5% PF00028(5-75) 8e-06 49.32% PF00028(3-91) 0.0002 37.11% PF00028 5.8e-07 33.7% PF00028 7.7e-18 69.9% PF00028 5.4e-13 53.8% PF00028 3e-20 77.9% 1dnvA(5-412) 3e-39 7.73% 2nlzA1(266-527) 2e-24 12.15% 1op4A(5-109) 4e-07 11.2% b.1.6 9.4e-13 44.4% b.1.6 8e-26 90.2% b.1.6 1.6e-23 81.4% b.1.6 2.8e-10 38.1% b.1.6 4e-29 100.6% b.1.6 5.4e-16 56.4%

Sequence

MRRGPRVALVLGLLRIYLAQANFAPHFFDNGVGSTNGNMALFSLPEDTPVGSHVYTLNGT
DPEGDPISYHISFDPSTRSVFSVDPNFGNITLVEELDREREDEIEAIISISDGLNLVAEK
VVILVTDANDEAPRFIQEPYIIRVPENIPAGSSIFKVQAEDKDTGSGGSVTYSLQNLHSS
KFSMDRHSGVLRLQAGATLDYEKSRAHYITVIAKDGGGRLRGADMVFSATTTVTINVEDV
QDTAPIFVGTPYYGYVYEDTLPGSEVLTVVAIDGDRGKPNHILYRLLNESDGIFEINETS
GAISVLQSPALLRREVYELHVQVTEVNSPGSPAAQATVPVTIRIVDLNNHPPTFYGESGP
QNKFELSMFEHPPQGEILRGLKITVNDSDQGANAKFNLRLVGPGGIFRVVPQTVLNEAQV
TIIVENSAAIDFEKSKLLTFKLLAIEVNTPEKFSSTADIVIQLLDTNDNVPKFTSHYYIA
RIPENAPGGSNVVAVTAVDPDTGPWGKVHYSIYGTGSDLFLIHPSTGLIYTQPWASLDAE
GTSRYNFYVKAEDMDGRYSLAEVFVTLLDVNDHYPQFVQSVQEKTMVLGTPLKIEATDQD
AEEPNNLVDYSITRAEPVNVFDIDAHTGEIRLKNSIRSLEALHNITPSGDYSWSLQVQAK
DRGSPSFSTTALLKIDITDTERLSRGSMAAFLIQTKDNPMKAVGVLAGVMAIVVAITVLI
STATFWRNKKSNKVLPVRRVLRRRPSPAPHTVRIEWLKFRRAKAATKFILKEDSPNENCN
NSRVGVMVPPRAPALPPPPKMASSMVAQQTVPTVSGSLTPQPSPQLPTPKTLGGPVQSSL
VSELKQKFEKKSLDNKAYI

Region:1-859
Length:859aa
Label:Full sequence
Reset:click