Input sequence

Protein name Collagen alpha-1(XVII) chain
Organism Gallus gallus Length 1495
Disorder content 93.4% ProS content 69.8%
IDEAL NA UniProt Q90584

Prediction

Order Disorder ProS RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP SEG:LCR TMHMM:TMhelix 0 1495 1-316 317-355 356-404 405-464 465-1495 317-355 405-464 1-316 356-404 465-1495 1-18 24-50 85-96 102-131 137-153 162-181 189-222 239-257 263-272 282-293 360-404 465-479 488-520 529-602 609-858 866-969 1014-1035 1040-1045 1077-1105 1131-1157 1162-1230 1240-1274 1309-1341 1373-1376 1397-1495 654-689 533-592 593-651 652-711 715-774 785-843 867-926 1433-1491 655-690 51-63 153-167 269-286 411-457 554-570 590-613 616-652 691-712 723-739 742-773 782-818 853-862 867-889 900-919 945-966 980-995 1023-1032 1094-1105 1128-1150 1166-1186 1207-1219 1256-1271 1295-1338 1402-1414 1449-1481 1485-1495 435-457 2pneA(8-43) 2e-05 38.89% PF01391 2.6e-09 41.5% PF01391 7.9e-07 33.3% PF01391 8.2e-13 53.2% PF01391 3.8e-14 57.6% PF01391 5.4e-05 12.1% PF01391 7.3e-09 40.1% PF01391 0.00019 2.2% 1af0A1(2-37) 0.0006 5.56%

Sequence

MDSVTKKTRQDGSEVTERQGGSSSGLKTSSHTGGSGVEKRSYTHSSGYVTSSGSGRLNSS
SSGYRQTQSPSSTLTKSPGSTFERKTYVNRHATYEGSSSANSSPEFPRKEFASASTRGRS
QSRESEIRVRLQSASPSGRWTELDDVKRLLKGSRSASCSPTRSSSSTLPIPKKAVVETKM
VTESSQSVSGTYDTTILNTTLPPYTWSSTLPAGSSLGGYHNSMGQSSSLINAMSHSTGSV
FGVPNNLAPSSHALNTGLSTSSTVFGVQNNLSPSSSALNASAASAAYGMKNTSQTNTMNS
TGVSASAGGTILSSQGDDFLHKDCKFLLLEKENAPAKKEMELLVMTKDSGKVFSASSTGL
NGGSFAEDTLKKEKQGLSSYAADTGLKSDANGGLKSAPTRDKATYAEIQNGGAGGAIGSA
PSWCPCGSCCSWWKWLLGLLLAWLLLLGLLFGLIALAEEVRKLKSRVDNLEKINHSFLTV
NQGNPYLEKDVSKVDFLHGVAPSSTFPFENEESVWLMVKSRLNKEIERGYFRGERGEPGM
KGDMGLQGPKGDRGLPGVPGIPGPVGHQGPEGPKGQKGSMGDPGMEGPMGQRGREGLPGP
RGEPGPPGFGEKGDRGAAGPPGPPGPPGSAGLKGPMGSPGPQGPPGPPGLQGFRGEAGLP
GAKGEKGATGPPGPKGDQGEKGARGMTGEQGSRGIPGPPGEPGAKGPAGQAGRDGQPGER
GEPGLMGMPGARGPPGPSGDTGEPGLTGPQGPPGLPGNPGRPGAKGEPGAPGKVISAEGS
STIALPGPPGPPGPIGPTGPPGVPGPVGPAGLPGQQGPRGEKGSAGEVVIETIKTEVSSL
ASQMLSDLQGRAGPPGPPGPPGESVQGLPGPRGPPGLPGPSGPPGRPGSSVSTSETFVSG
PPGPPGPPGPKGDQGEPGPRGFTGEPGEPGLPGFSSHGGTVTMQGPPGPPGPPGPKGDAG
VPGAPGIPGTSRGGSRQIQGPPGPPGPPGPPGPGGSSSQEIQQYVADYLKSDNVRHYLTG
VQGPPGPPGPPGILTTADGKNFDFAELATRVMSYVTSSSDHYQSFASSVSTTSVLYQELL
NMLQREEIRQYLVGPRGPPGPPGPGVDGMSLSLDYDELTRRFISYLTSSGMSIGLPGPPG
PPGTPGISYSELTAYLRNSEFSGLVGPPGPAGPPGPPGIPGSSGISLEDISAYLQSVGYS
SISGIQGPPGPPGPPGPPGFSGTGLLSYADITHSDEFRSELIQYLKSDEVRSYISGPPGP
PGPRGPPGPKGDSGLVAGSMSSLYHDSLASERLHGGSIGAEGSHGGSLGASSSYGSSMSS
SMSSYSASMGSDGSYGASVGSDGSFDGLLTAEESHRRSAGPGRSYSSSFTGSLDYNELAR
HVSENLQSRGILQDLMSYTGQGPPGPPGPPGPPGISRVFAAYGNVTEDLMDFFRTHGTVR
GPPGEKGERGYPGPKGDPGPMGPPGRHGQRGPKGEKGEKGEQMYSGRRRRRSVGV

Region:1-1495
Length:1495aa
Label:Full sequence
Reset:click