Input sequence

Protein name Junctional adhesion molecule C
Organism Mus musculus Length 310
Disorder content 25.5% ProS content 14.2%
IDEAL NA UniProt Q9D8B7

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 310 1-29 30-180 181-183 184-190 191-267 268-310 30-180 191-267 1-29 184-190 268-310 6-29 268-275 299-310 43-241 31-230 153-228 31-140 153-221 137-238 35-140 33-160 131-231 3-15 18-24 242-259 245-267 1f97A(13-204) 4e-29 37.0% 1nbqA(4-199) 2e-39 34.0% PF07679(14-81) 3e-10 42.11% PF07686 3.6e-08 37.7% PF00047 5.4e-10 43.8% 1bqsA1(6-90) 1e-12 18.63% 1olzA1(1-89) 4e-08 19.81% b.1.1 1.2e-16 47.7% b.1.1 9.4e-23 66.3%

Sequence

MALSRRLRLRLYARLPDFFLLLLFRGCMIEAVNLKSSNRNPVVHEFESVELSCIITDSQT
SDPRIEWKKIQDGQTTYVYFDNKIQGDLAGRTDVFGKTSLRIWNVTRSDSAIYRCEVVAL
NDRKEVDEITIELIVQVKPVTPVCRIPAAVPVGKTATLQCQESEGYPRPHYSWYRNDVPL
PTDSRANPRFQNSSFHVNSETGTLVFNAVHKDDSGQYYCIASNDAGAARCEGQDMEVYDL
NIAGIIGGVLVVLIVLAVITMGICCAYRRGCFISSKQDGESYKSPGKHDGVNYIRTSEEG
DFRHKSSFVI

Region:1-310
Length:310aa
Label:Full sequence
Reset:click