Input sequence

Protein name Protocadherin alpha-C1
Organism Homo sapiens Length 963
Disorder content 19.3% ProS content 16.1%
IDEAL NA UniProt Q9H158

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 963 1-3 4-666 667-675 676-704 705-732 733-779 780-878 879-916 917-963 4-666 676-704 733-779 879-916 1-3 667-675 705-732 780-878 917-963 1-3 667-675 705-731 780-782 793-801 813-878 917-934 944-963 184-556 23-280 130-645 25-225 21-102 349-435 242-330 20-103 129-224 238-331 345-436 450-546 566-657 189-609 17-286 72-170 577-645 16-116 118-225 227-332 334-437 433-569 549-658 493-504 633-639 646-660 693-702 759-771 931-955 682-704 3q2wA(59-447) 3e-25 28.75% 2a62A(12-262) 3e-17 30.04% 3q2wA(6-529) 1e-70 23.86% 2wcpA(19-206) 4e-26 25.73% PF08266(2-83) 2e-13 45.12% PF00028(5-91) 1e-07 41.38% PF00028(5-91) 0.0003 38.89% PF08266 2.9e-38 137.7% PF00028 8.6e-11 46.5% PF00028 9.9e-17 66.2% PF00028 1.1e-10 46.2% PF00028 3e-13 54.6% PF00028 0.00024 25.1% 1dnvA(14-409) 2e-53 6.02% 1t8rA(2-298) 3e-21 7.72% 1fx3A(38-129) 4e-08 7.0% 1edhA1(13-85) 0.0002 12.33% b.1.6 3.1e-07 25.9% b.1.6 1e-24 86.4% b.1.6 1e-22 79.5% b.1.6 3e-24 84.7% b.1.6 6.3e-27 93.1% b.1.6 2.5e-16 58.1%

Sequence

MVGCGVAVLCLWVSCGAAAGQLEYSVPEETERGVAVGNLSADLRLPAAAMSSRNFRFLSS
HRELYFGVDLPSGNLVVREPADREQLCRAKAACVLTYDLVLEDPLELHKIRIHVLDTNDN
SPLFPAGDVQLHIPEFLTPGARFTLPNAQDDDEGSNGILSYSLSPSQHFRLDMGSRVDGS
EYPELVLEKALDREQRATHLLVLTARDGGLPARSGDAQVTIIVVDTNDNAPVFERSVYRT
KVPETAPNGTVLFRVQALDPDEGSNGEVQYSLSNSTQAELRHRFHVHPKSGEVQVAASLG
PPETLLEAYIEARDEGVFGLASTAKLLVEVTDVNDHAPELDFLTLSNPVPEDAAPGTVIA
LFSVKDEDLDSNGRVICGMSSAGPFQLTASFDNYYSLLIDGPLDREQISEYQVLITASDS
GSPPLSTRRTITVSVADVNDNTPNFPQPQQELFVAENNGPGASLGRVFAQDPDLGKNGLV
SYELLDVISEGPSASSLLAVESSSGAITAKTSFDFEQLRGFHFQVEGRDGGIPPRSATVT
INLFVVDRNDNYPVILFPLPRNGSVPVEIVPRSARTGHLVTKVVAEDADSGSNAWLSYHI
SRASDSSLFRISANIGELRTARLVLPTDAVKQRVVVVVRDHGDPPLSSSVTLGVLLSNSV
PQLLPDFEDVWEPGGQLSAQNLYLVIALACISFLFLGCLLFFVCTKLHQSPGCCAQSCCR
STEDLRYGSKMVSNPCMTSATIDVTTVERLSQTYLYRASLGLGSDNNSLLLRGEYNAADL
RNLATGVGLNLPISCIQIRNRKGDHANVNAMPRQPNPDWRYSASLRAGMHSSVHLEEAGI
LRAGPGGPDQQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDK
FIIPGSPAIISIRQEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDN
SDQ

Region:1-963
Length:963aa
Label:Full sequence
Reset:click