Input sequence

Protein name Protocadherin-18
Organism Homo sapiens Length 1135
Disorder content 38.0% ProS content 25.2%
IDEAL NA UniProt Q9HCL0

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 1135 1-20 21-683 684-697 698-720 721-935 936-953 954-1135 21-683 698-720 936-953 1-20 684-697 721-935 954-1135 1-20 684-686 696-697 721-745 752-772 801-809 814-821 841-898 917-935 981-989 995-1027 1033-1044 1050-1067 1083-1107 1112-1135 197-664 30-133 83-238 141-673 34-238 474-567 253-345 588-666 371-455 142-236 28-111 28-114 142-237 251-345 365-456 470-567 586-677 202-635 78-315 600-711 32-130 131-238 234-394 347-457 459-568 570-678 772-783 957-965 999-1010 698-720 3q2wA(59-528) 1e-25 27.15% 1wuzA(5-103) 5e-13 41.35% 3ppeA(52-203) 7e-06 26.71% 3q2wA(4-537) 5e-69 23.5% 2wcpA(20-206) 5e-25 26.09% PF00028(5-92) 1e-10 43.62% PF00028(3-92) 3e-07 33.33% PF00028(3-81) 2e-06 34.18% PF00028(7-91) 3e-05 37.65% PF00028(1-91) 0.0001 32.65% PF08266(1-81) 2e-10 35.71% PF08266 6.5e-08 23.4% PF00028 4.5e-15 60.7% PF00028 1.1e-21 82.7% PF00028 1.3e-13 55.9% PF00028 8e-18 69.8% PF00028 1.2e-05 29.4% 1dnvA(14-412) 8e-58 6.8% 2nlzA1(313-527) 1e-23 10.2% 1p32A(5-114) 3e-06 3.48% b.1.6 3.3e-06 24.0% b.1.6 1.6e-26 92.6% b.1.6 1.2e-32 112.7% b.1.6 5.7e-22 78.4% b.1.6 1.5e-28 99.5% b.1.6 1.2e-17 62.0%

Sequence

MHQMNAKMHFRFVFALLIVSFNHDVLGKNLKYRIYEEQRVGSVIARLSEDVADVLLKLPN
PSTVRFRAMQRGNSPLLVVNEDNGEISIGATIDREQLCQKNLNCSIEFDVITLPTEHLQL
FHIEVEVLDINDNSPQFSRSLIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAND
FFNIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSILKISISDSN
DNSPAFEQQSYIIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIMETFKID
SERGHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEININLMS
PGKEEISYIFEGDPIDTFVALVRVQDKDSGLNGEIVCKLHGHGHFKLQKTYENNYLILTN
ATLDREKRSEYSLTVIAEDRGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFVISENNSP
GAYITTVTATDPDLGENGQVTYTILESFILGSSITTYVTIDPSNGAIYALRIFDHEEVSQ
ITFVVEARDGGSPKQLVSNTTVVLTIIDENDNVPVVIGPALRNNTAEITIPKGAESGFHV
TRIRAIDRDSGVNAELSCAIVAGNEENIFIIDPRSCDIHTNVSMDSVPYTEWELSVIIQD
KGNPQLHTKVLLKCMIFEYAESVTSTAMTSVSQASLDVSMIIIISLGAICAVLLVIMVLF
ATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSPS
SSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQLLSMLHQ
GQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEG
FSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPTQPQQ
QHPHQSLEDDAQPADSGEKKKSFSTFGKDSPNDEDTGDTSTSSLLSEMSSVFQRLLPPSL
DTYSECSEVDRSNSLERRKGPLPAKTVGYPQGVAAWAASTHFQNPTTNCGPPLGTHSSVQ
PSSKWLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS

Region:1-1135
Length:1135aa
Label:Full sequence
Reset:click