Input sequence

Protein name Protocadherin gamma-A11
Organism Homo sapiens Length 935
Disorder content 11.1% ProS content 7.7%
IDEAL NA UniProt Q9Y5H2

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 935 1-12 13-677 678-683 684-780 781-839 840-862 863-867 868-913 914-935 13-677 684-780 840-862 868-913 1-12 678-683 781-839 863-867 914-935 5-12 678-683 781-782 800-804 813-839 863-867 914-932 201-561 32-138 462-667 128-237 160-666 31-236 31-112 580-665 356-443 250-339 462-542 30-113 248-339 353-444 458-554 576-666 202-525 27-313 464-633 26-130 128-235 237-340 342-445 447-555 556-667 4-26 543-554 695-701 704-713 916-935 13-27 693-715 3q2vA(66-439) 8e-29 30.55% 1wyjA(13-119) 2e-23 45.79% 4nupA(11-217) 2e-12 29.63% 2ee0A(8-114) 3e-06 32.46% 3q2wA(25-541) 3e-84 24.49% 2wcpA(15-207) 4e-24 19.91% PF08266(2-83) 2e-18 51.22% PF00028(6-91) 4e-10 43.02% PF00028(4-91) 7e-08 42.05% PF00028(3-92) 3e-07 41.3% PF00028(5-80) 0.0005 38.27% PF08266 4.5e-52 183.6% PF00028 8.9e-20 76.3% PF00028 7.8e-15 59.9% PF00028 6.7e-20 76.7% PF00028 1.8e-13 55.4% 2nlzA1(217-528) 4e-66 12.87% 2nlzA1(258-529) 3e-27 10.37% 1f15A(1-155) 1e-19 13.37% b.1.6 1.1e-10 37.5% b.1.6 1.2e-23 82.7% b.1.6 1.8e-28 99.3% b.1.6 7.9e-27 93.6% b.1.6 6.6e-30 104.2% b.1.6 8.6e-21 74.3%

Sequence

MANRLQRGDRSRLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPREL
AKRGVRIVSRGKTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGV
EVEIIDINDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFS
LQLRGRTDGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHI
PMFTQSVYRVSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTG
EVQVRGSLDFEKYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILEN
SPPGTVIALLNVQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYN
ITLTATDQGSPPLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDP
DSKQNALVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGD
PPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSG
QNAWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVT
LTVAVADSIPEVLADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRW
HKSRLLQASEGGLAGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTL
ISQESCEKSEPLLIAEDSAIILGKCDPTSNQQAPPNTDWRFSQAQRPGTSGSQNGDDTGT
WPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYI
PGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK

Region:1-935
Length:935aa
Label:Full sequence
Reset:click