Input sequence

Protein name Protocadherin alpha-C2
Organism Homo sapiens Length 1007
Disorder content 22.5% ProS content 16.7%
IDEAL NA UniProt Q9Y5I4

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 1007 1-20 21-693 694-698 699-729 730-763 764-824 825-945 946-960 961-1007 21-693 699-729 764-824 946-960 1-20 694-698 730-763 825-945 961-1007 1-3 17-20 730-749 754-763 825-837 843-848 857-907 917-931 938-945 961-978 988-1007 208-602 42-144 97-249 153-680 47-249 43-124 264-356 594-681 374-459 475-570 42-127 153-248 262-356 370-460 474-570 591-681 215-638 47-329 594-683 37-141 142-249 251-357 359-461 462-571 573-682 14-37 65-78 716-729 975-999 21-40 707-729 3q2wA(59-480) 3e-37 30.88% 1wuzA(3-103) 5e-13 48.57% 3ppeA(53-203) 1e-06 27.22% 3q2wA(5-540) 2e-84 24.56% 2wcpA(19-206) 6e-25 23.3% PF08266(2-81) 5e-11 52.44% PF00028(3-92) 2e-09 41.94% PF00028(5-92) 1e-08 38.64% PF00028(5-91) 2e-07 40.23% PF00028(2-92) 5e-07 39.58% PF08266 1.1e-31 115.9% PF00028 5.9e-13 53.6% PF00028 8.5e-24 89.7% PF00028 3.1e-09 41.3% PF00028 1.9e-17 68.6% PF00028 5.7e-11 47.0% 1dnvA(16-414) 2e-61 7.76% 2nlzA1(266-530) 2e-25 11.49% 1edhA1(7-99) 9e-12 17.02% b.1.6 1.3e-08 32.6% b.1.6 4.9e-28 97.8% b.1.6 3.2e-31 108.7% b.1.6 1.3e-22 79.1% b.1.6 4.3e-29 103.3% b.1.6 1.3e-22 79.1%

Sequence

MEQAGTRPAATEHPRLRRPMPWLLLLPLLLLLLLLLPGPAASQLRYSVPEEQAPGALVGN
VARALGLELRRLGPGCLRINHLGAPSPRYLELDLTSGALFVNERIDREALCEQRPRCLLS
LEVLAHNPVAVSAVEVEILDINDNSPRFPRPNYQLQVSESVAPGARFHIESAQDPDVGAN
SVQTYELSPSEHFELDLKPLQENSKVLELVLRKGLDREQAALHHLVLTAVDGGIPARSGT
AQISVRVLDTNDNSPAFDQSTYRVQLREDSPPGTLVVKLNASDPDEGSNGELRYSLSSYT
SDRERQLFSIDASTGEVRVIGGLDYEEASSYQIYVQATDRGPVPMAGHCKVLVDIVDVND
NAPEVVLTDLYSPVPENATPNTIVAVLSVNDQDSGPNRKVSLGLEATLPFRLNGFGNSYT
LVVSGPLDRERVAVYNITVTATDGGIPQLTSLRTLKVEISDINDNPPSFLEDSYSIYIQE
NNLPGVLLCTVQATDPDEKENAEVTYSLLEREIQGLPVTSYVSINSASGSLYAVNSFDYE
KFREFFVTVEAQDKGSPPLSSTVTANVYVVDMNDHAPHILYPTSTNSSAAFEMVPRTAPA
GYLVTKVIAMDSDSGQNAWLFYHLAQTSDLDLFKVELHTGEIRTTRKMGDESGSTFNLTV
VVRDNGEPSLSASVAITVAVVDRVSKILPDTQRHVKSPRTYSEITLYLIIALSTVSFIFL
LTIIILSIIKCYRYTAYGTACCGGFCGVRERSPAELYKQANNNIDARIPHGLKVQPHFIE
VRGNGSLTKTYCYKACLTAGSGSDTFMFYNTGAQTGPGPSGAQAAVTDSRNLTGQSGQNA
GNLIILKNEAVSQNEPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWPTVS
SATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIRQEP
TNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ

Region:1-1007
Length:1007aa
Label:Full sequence
Reset:click